RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 AP3D1O14617 1153 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 ARPC2O15144 300 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 CBR3O75828 277 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 LINGO3P0C6S8 592 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 HK1P19367 917 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 RPS4Y1P22090 263 aaKnown RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 DNASE1P24855 282 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 DPP4P27487 766 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 KDELR2P33947 212 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 MSX2P35548 267 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 GZMMP51124 257 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 ZNF117Q03924 483 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 CEACAM7Q14002 265 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 MAPK14Q16539 360 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 NDUFAF6Q330K2 333 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 MTX3Q5HYI7 312 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 C1orf146Q5VVC0 180 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 TIGD3Q6B0B8 471 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 DHRS4L2Q6PKH6 230 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 ARSKQ6UWY0 536 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 CYP2R1Q6VVX0 501 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 CADM2Q8N3J6 435 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 FAM109AQ8N4B1 249 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 OR5M9Q8NGP3 310 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 VANGL1Q8TAA9 524 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 TMEM234Q8WY98 164 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 TAMM41Q96BW9 452 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 SLC7A6OSQ96CW6 309 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 RSRC1Q96IZ7 334 aaKnown RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 CLPTM1LQ96KA5 538 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 TTYH2Q9BSA4 534 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 LAT2Q9GZY6 243 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 CLEC4MQ9H2X3 399 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 EVA1AQ9H8M9 152 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 RASSF1Q9NS23 344 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 TAS2R10Q9NYW0 307 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
TMEM116-218ENST00000552839 VDAC3Q9Y277 283 aa10.3□□□□□ -0.76
TMEM116-218ENST00000552839 NINQ8N4C6 2090 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 A0A087WZY1 265 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 A0A0G2JNJ9 132 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 PINLYPA6NC86 204 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CFAP73A6NFT4 308 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CLDN24A6NM45 220 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 NPIPB9F8W1W9 429 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 GSC2O15499 205 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 TRIM3O75382 744 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ACVR2AP27037 513 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 SRD5A2P31213 254 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 PTGDSP41222 190 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 MAGEA5P43359 124 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 DSCR4P56555 118 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 PCBP3P57721 371 aaKnown RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 DMTNQ08495 405 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 TRIM25Q14258 630 aaKnown RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 MAPK11Q15759 364 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 IFI44LQ53G44 452 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 RTL6Q6ICC9 239 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ZNF585AQ6P3V2 769 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 APOOLQ6UXV4 268 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 DEF8Q6ZN54 512 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CCDC80Q76M96 950 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ZNF771Q7L3S4 317 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 BIVMQ86UB2 503 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CYP4Z1Q86W10 505 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 SPATA24Q86W54 205 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CDC20BQ86Y33 519 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 TMEM251Q8N6I4 163 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 OR5W2Q8NH69 310 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 GEMIN6Q8WXD5 167 aaKnown RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 POP5Q969H6 163 aaKnown RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ZG16BQ96DA0 208 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ASB9Q96DX5 294 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 SFXN2Q96NB2 322 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 GNRHR2Q96P88 292 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CADM1Q9BY67 442 aaKnown RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 PCDHAC1Q9H158 963 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ZNF703Q9H7S9 590 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 ZDHHC11Q9H8X9 412 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 EXOSC3Q9NQT5 275 aaKnown RBP10.29□□□□□ -0.76
TMEM116-218ENST00000552839 STOML1Q9UBI4 398 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 Q9UFV3 132 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 SH3GLB1Q9Y371 365 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 FAM215AQ9Y5M1 114 aa10.29□□□□□ -0.76
TMEM116-218ENST00000552839 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 LRRC3CA6NJW4 275 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 M0R3H8 397 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 SYT5O00445 386 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 FRS3O43559 492 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 MFN2O95140 757 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 IFNW1P05000 195 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 FESP07332 822 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 GKN3PP0CG01 181 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 GLI4P10075 376 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 CD247P20963 164 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 ADH7P40394 386 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 GAS1P54826 345 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 EEF1A1P68104 462 aaKnown RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 SKP2Q13309 424 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms