RNA–Protein interactions for RNA: ENST00000551872.1

DCTN2-223, Transcript of dynactin subunit 2, human

TSL 2

Gene DCTN2, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN2-223	ENST00000551872	LSP1	P33241	339 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	PCGF2	P35227	344 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	APOBEC1	P41238	236 aa	Known RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SLC1A3	P43003	542 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	KIR2DL2	P43627	348 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	HTR3A	P46098	478 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	CLK1	P49759	484 aa	Known RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	RNF144A	P50876	292 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	GZMM	P51124	257 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	RAC3	P60763	192 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	CDK6	Q00534	326 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	FOXF2	Q12947	444 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SELPLG	Q14242	412 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	LARS2	Q15031	903 aa	Known RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SYT14P1	Q58G82	188 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	PDSS1	Q5T2R2	415 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	HBM	Q6B0K9	141 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	REP15	Q6BDI9	236 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SP5	Q6BEB4	398 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	C6orf89	Q6UWU4	347 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	PLXDC2	Q6UX71	529 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SPATA21	Q7Z572	469 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	HMGN2P46	Q86SG4	172 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	CALHM3	Q86XJ0	350 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	VRK2	Q86Y07	508 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SLC30A8	Q8IWU4	369 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	C11orf65	Q8NCR3	313 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	HIPK4	Q8NE63	616 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	RNASE6	Q93091	150 aa	Known RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	MARVELD3	Q96A59	401 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	STARD4	Q96DR4	205 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	GMPPA	Q96IJ6	420 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	SRXN1	Q9BYN0	137 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	ADAM19	Q9H013	955 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	MYLK2	Q9H1R3	596 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	TMEM185B	Q9H7F4	350 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	EVA1A	Q9H8M9	152 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	GLRX2	Q9NS18	164 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	CHRNA9	Q9UGM1	479 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	PACSIN3	Q9UKS6	424 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	MCTS1	Q9ULC4	181 aa	Known RBP	6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	AKAP6	Q13023	2319 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	PDZD2	O15018	2839 aa		6.62	□□□□□ -1.35
DCTN2-223	ENST00000551872	AKAP9	Q99996	3911 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	POLQ	O75417	2590 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	TMEM229A	B2RXF0	380 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	C5orf58	C9J3I9	102 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	AP3D1	O14617	1153 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	MRAS	O14807	208 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	CXCL13	O43927	109 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	CCDC22	O60826	627 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	NPIPB7	O75200	414 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	GCM2	O75603	506 aa	Predicted RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	GOSR1	O95249	250 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	PMS2P2	O95744	297 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	PRF1	P14222	555 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	UQCRB	P14927	111 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SLC6A2	P23975	617 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SFTPD	P35247	375 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	EIF1AX	P47813	144 aa	Known RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	POLR2H	P52434	150 aa	Known RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	MTPN	P58546	118 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	MERTK	Q12866	999 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	NFYC	Q13952	458 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	CYLC2	Q14093	348 aa	Predicted RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SCARB2	Q14108	478 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	RNPS1	Q15287	305 aa	Known RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	TMEM176B	Q3YBM2	270 aa	Predicted RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	ABLIM2	Q6H8Q1	611 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	NANOGP8	Q6NSW7	305 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	C8orf82	Q6P1X6	216 aa	Predicted RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	FAM214B	Q7L5A3	538 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	CHMP1B	Q7LBR1	199 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	ZNF550	Q7Z398	422 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	GDF7	Q7Z4P5	450 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	COMTD1	Q86VU5	262 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SNX32	Q86XE0	403 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	ADGRG3	Q86Y34	549 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	KRT73	Q86Y46	540 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	ZZZ3	Q8IYH5	903 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	ZNF295-AS1	Q8N0V1	137 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	GCNT2	Q8N0V5	402 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SLC43A2	Q8N370	569 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	CLIP4	Q8N3C7	705 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	LSMEM1	Q8N8F7	131 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	OR6K3	Q8NGY3	331 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	NFKBID	Q8NI38	313 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	RP9	Q8TA86	221 aa	Known RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SMPDL3B	Q92485	455 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	INTS12	Q96CB8	462 aa	Known RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	LRRC58	Q96CX6	371 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	REXO5	Q96IC2	774 aa	Known RBP	6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	SPATA5L1	Q9BVQ7	753 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	ARMC7	Q9H6L4	198 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	NANOG	Q9H9S0	305 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	BCO1	Q9HAY6	547 aa		6.61	□□□□□ -1.35
DCTN2-223	ENST00000551872	C12orf10	Q9HB07	376 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms