RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 OR1F2PQ96R84 312 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TIMP4Q99727 224 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 SSX3Q99909 188 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ADAT1Q9BUB4 502 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF426Q9BUY5 554 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TM6SF2Q9BZW4 377 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TOLLIPQ9H0E2 274 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ARL6Q9H0F7 186 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 AP5M1Q9H0R1 490 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 C1orf198Q9H425 327 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 REEP4Q9H6H4 257 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 RPF1Q9H9Y2 349 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 NMNAT1Q9HAN9 279 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 CRTAC1Q9NQ79 661 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DUSP22Q9NRW4 184 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 FAM120CQ9NX05 1096 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TEX10Q9NXF1 929 aaPredicted RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 ABRACLQ9P1F3 81 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 UBQLN1Q9UMX0 589 aaKnown RBP4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 GAB2Q9UQC2 676 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 DLGAP4Q9Y2H0 992 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 IRAK3Q9Y616 596 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 BTAF1O14981 1849 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 MYO18AQ92614 2054 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 A0A1B0GTI1 187 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 BTBD17A6NE02 478 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NPEPPSL1A6NEC2 478 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF503-AS2A6NEH8 195 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR51F1A6NGY5 319 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NCF1BA6NI72 391 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR6C76A6NM76 312 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NCF1CA8MVU1 366 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 LRRN3E7EW58 273 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 FFAR1O14842 300 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ARPC5O15511 151 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PRODHO43272 600 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TXNL1O43396 289 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MBTPS2O43462 519 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 BCL2L11O43521 198 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR2T1O43869 369 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 BRINP1O60477 761 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 UGDHO60701 494 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 EFCAB14O75071 495 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM127O75204 238 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CLDN11O75508 207 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR2F2O95006 317 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SLC25A27O95847 323 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ACTL6AO96019 429 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 F2P00734 622 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 IGLV3-25P01717 112 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 LRG1P02750 347 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CD5P06127 495 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ITGA5P08648 1049 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CD3GP09693 182 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ALPIP09923 528 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SBK2P0C263 348 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 LINC00614P0C842 121 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 EBLN1P0CF75 366 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 FAM157CP0CG43 387 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 STAG3L1P0CL83 205 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR8G3PP0DMU2 310 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 C1GALT1C1LP0DN25 315 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR12D1P0DN82 309 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CXCL8P10145 99 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF35P13682 527 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 HLA-GP17693 338 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SDC1P18827 310 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 S1PR1P21453 382 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TACR1P25103 407 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NFYBP25208 207 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NDUFV1P49821 464 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CCR8P51685 355 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SUCLG1P53597 346 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 CDH12P55289 794 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SOX8P57073 446 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 DAOAP59103 153 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MRPS11P82912 194 aaKnown RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SPIBQ01892 262 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NAAAQ02083 359 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 NHLH2Q02577 135 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PJVKQ0ZLH3 352 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM115Q12893 351 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF177Q13360 481 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MADCAM1Q13477 382 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR2F1Q13607 317 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 GTF2H2Q13888 395 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ARHGEF7Q14155 803 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 HEPACAMQ14CZ8 416 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 GGTA1PQ4G0N0 100 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ATP13A5Q4VNC0 1218 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 KRBOX4Q5JUW0 171 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 SAPCD1Q5SSQ6 148 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 DACT2Q5SW24 774 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 ATXN7L2Q5T6C5 722 aaPredicted RBP4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 OR2G6Q5TZ20 316 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 MRNIPQ6NTE8 343 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 H3F3CQ6NXT2 135 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 GTF2H2CQ6P1K8 395 aa4.89□□□□□ -1.63
LSM3P2-201ENST00000551246 PGBD2Q6P3X8 592 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms