RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ZBTB44Q8NCP5 570 aa14.79□□□□□ -0.04
RBFOX1-212ENST00000550418 OR52N1Q8NH53 320 aa14.79□□□□□ -0.04
RBFOX1-212ENST00000550418 SEC22AQ96IW7 307 aa14.79□□□□□ -0.04
RBFOX1-212ENST00000550418 SEC22CQ9BRL7 303 aa14.79□□□□□ -0.04
RBFOX1-212ENST00000550418 INIPQ9NRY2 104 aa14.79□□□□□ -0.04
RBFOX1-212ENST00000550418 NPFFR2Q9Y5X5 522 aa14.79□□□□□ -0.04
RBFOX1-212ENST00000550418 TRAV27A0A087WT01 109 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 MPIG6BO95866 241 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 CSF3P09919 207 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 SLC2A5P22732 501 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 CHATP28329 748 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 PTGER1P34995 402 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 TEKQ02763 1124 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 COX20Q5RI15 118 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 GRAMD2AQ8IUY3 354 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 SLC35F3Q8IY50 421 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF619Q8N2I2 560 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 PGBD5Q8N414 524 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 OR4K17Q8NGC6 315 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 AP1S3Q96PC3 154 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ACSS1Q9NUB1 689 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 RLIMQ9NVW2 624 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 BACE2Q9Y5Z0 518 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 TMEM129A0AVI4 362 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ACOD1A6NK06 481 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 B4DGG1 531 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 FBXO24O75426 580 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 DIRAS3O95661 229 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 PLGP00747 810 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ATP1B1P05026 303 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 C6P13671 934 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 CD300CQ08708 224 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 GPR50Q13585 617 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 UBXN2BQ14CS0 331 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 C6orf132Q5T0Z8 1188 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 BEND4Q6ZU67 534 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 LAS2Q8IYD9 372 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ST7LQ8TDW4 575 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 MARC2Q969Z3 335 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 RAB7BQ96AH8 199 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 GABARAPL3Q9BY60 117 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 SBK3P0C264 359 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 DHCR24Q15392 516 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 RTP2Q5QGT7 225 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF776Q68DI1 518 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 TMEM225Q6GV28 225 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 MAMDC2Q7Z304 686 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 DNAAF1Q8NEP3 725 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 LINC01599Q8WXQ3 324 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 HOXB13Q92826 284 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 PGAM5Q96HS1 289 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 NRIP3Q9NQ35 241 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 NIT2Q9NQR4 276 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 OR1A2Q9Y585 309 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF705GA8MUZ8 300 aaPredicted RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 TYRP1P17643 537 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 SRP9P49458 86 aaKnown RBP14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 CCINQ13939 588 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 XAF1Q6GPH4 301 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 OLIG1Q8TAK6 271 aa14.78□□□□□ -0.04
RBFOX1-212ENST00000550418 A0A1W2PS29 197 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 SULT1B1O43704 296 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 RDH16O75452 317 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF704Q6ZNC4 412 aaPredicted RBP14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 RNF141Q8WVD5 230 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 IGSF21Q96ID5 467 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 PTCHD1Q96NR3 888 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 TMEM38AQ9H6F2 299 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 MED20Q9H944 212 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 NDUFB11Q9NX14 153 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 LUZP4Q9P127 313 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 CA5BQ9Y2D0 317 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 SYT7O43581 403 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 RPS2P15880 293 aaKnown RBP14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 PGCP20142 388 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 SIRPAP78324 504 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 GPLD1P80108 840 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 EXOSC2Q13868 293 aaKnown RBP14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 TMUB2Q71RG4 321 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 TMEM179BQ7Z7N9 219 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 TMEM200AQ86VY9 491 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 PNPLA2Q96AD5 504 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 OR2M4Q96R27 311 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 SMIM3Q9BZL3 60 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 SLC25A37Q9NYZ2 338 aa14.77□□□□□ -0.04
RBFOX1-212ENST00000550418 ZNF705FA8MVS1 300 aaPredicted RBP14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 ZNF705DP0CH99 300 aaPredicted RBP14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 ZNF705BP0CI00 300 aaPredicted RBP14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 RNH1P13489 461 aaKnown RBP14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 HTR1FP30939 366 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 C17orf107Q6ZR85 190 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 TCTE3Q8IZS6 198 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 ACOT4Q8N9L9 421 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 LKAAEAR1Q8TD35 194 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 TOMM40LQ969M1 308 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 MMABQ96EY8 250 aaPredicted RBP14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 RHNO1Q9BSD3 238 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 TCEAL2Q9H3H9 227 aaPredicted RBP14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 FAM230AA0A1W2PPH8 454 aa14.77□□□□□ -0.05
RBFOX1-212ENST00000550418 TNFP01375 233 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms