RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 IDUAP35475 653 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 SERPINB5P36952 375 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 BSPH1Q075Z2 132 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 PTGR1Q14914 329 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 QPRTQ15274 297 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 TOMM34Q15785 309 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 SPDYE7PQ495Y7 208 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 ATP6AP1LQ52LC2 224 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 ARL13AQ5H913 290 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 ALKBH2Q6NS38 261 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 C3orf33Q6P1S2 294 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 BHLHB9Q6PI77 547 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 DNM1P46Q6ZS02 220 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 BHLHA15Q7RTS1 189 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 P2RY8Q86VZ1 359 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 TMCO5AQ8N6Q1 288 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 KBTBD8Q8NFY9 601 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 PIWIL2Q8TC59 973 aaKnown RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 OIT3Q8WWZ8 545 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEK3-201ENST00000550331 COQ8BQ96D53 544 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 TRIM2Q9C040 744 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 BHLHE41Q9C0J9 482 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 NMUR2Q9GZQ4 415 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 SLCO5A1Q9H2Y9 848 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 CXorf36Q9H7Y0 433 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 BARX1Q9HBU1 254 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 FAIMQ9NVQ4 179 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 ING1Q9UK53 422 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 LIPT1Q9Y234 373 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 DTNAQ9Y4J8 743 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 MAGED1Q9Y5V3 778 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.75□□□□□ -1.33
NEK3-201ENST00000550331 NPIPA5A0A0B4J1W7 369 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 GOLGA8QA0A0J9YX86 632 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 A0A1W2PP18 115 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 GOLGA8OA6NCC3 632 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 DPRXA6NFQ7 191 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 SERINC4A6NH21 518 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ZNF724A8MTY0 619 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 NPIPA7E9PJI5 369 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 GOLGA8NF8WBI6 632 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 SMAD9O15198 467 aaKnown RBP6.74□□□□□ -1.33
NEK3-201ENST00000550331 TLX2O43763 284 aaPredicted RBP6.74□□□□□ -1.33
NEK3-201ENST00000550331 PEX11AO75192 247 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 STX11O75558 287 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 C6orf47O95873 294 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 IGLV1-40P01703 118 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 TP53P04637 393 aaPredicted RBP6.74□□□□□ -1.33
NEK3-201ENST00000550331 GUSBP08236 651 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 NPIPA8P0DM63 369 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ALDH3A1P30838 453 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 C21orf58P58505 322 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 SKP2Q13309 424 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 PPA1Q15181 289 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 TSC22D1Q15714 1073 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ZNF141Q15928 474 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 PGGHGQ32M88 737 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 NDUFAF6Q330K2 333 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 TIGD2Q4W5G0 525 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 TIMM23BQ5SRD1 257 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 IL23RQ5VWK5 629 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 DTX2Q86UW9 622 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 RIMKLAQ8IXN7 391 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ZNF619Q8N2I2 560 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 RIBC1Q8N443 379 aaPredicted RBP6.74□□□□□ -1.33
NEK3-201ENST00000550331 ZNF614Q8N883 585 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 FNDC5Q8NAU1 212 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 SLC25A43Q8WUT9 341 aaPredicted RBP6.74□□□□□ -1.33
NEK3-201ENST00000550331 TMEM234Q8WY98 164 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ST8SIA1Q92185 356 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 MUCL1Q96DR8 90 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 RADILQ96JH8 1075 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 OR7D2Q96RA2 312 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 SDF2Q99470 211 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 TRAF4Q9BUZ4 470 aaPredicted RBP6.74□□□□□ -1.33
NEK3-201ENST00000550331 DUSP26Q9BV47 211 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 REG4Q9BYZ8 158 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ZNF350Q9GZX5 532 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ANKZF1Q9H8Y5 726 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 SERINC1Q9NRX5 453 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 ASIC5Q9NY37 505 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 KCNE3Q9Y6H6 103 aa6.74□□□□□ -1.33
NEK3-201ENST00000550331 IGKV3D-15A0A087WSY6 115 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 OR5H1A6NKK0 313 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 CFLARO15519 480 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 PHF1O43189 567 aaPredicted RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 CD5LO43866 347 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 UGT2B17O75795 530 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 LYZL6O75951 148 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 SLU7O95391 586 aaKnown RBP6.73□□□□□ -1.33
NEK3-201ENST00000550331 PGM3O95394 542 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 H6PDO95479 791 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 IGHV4-39P01824 125 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 GGT1P19440 569 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 IGHV1-2P23083 117 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 ACVR1BP36896 505 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 CDKN1AP38936 164 aa6.73□□□□□ -1.33
NEK3-201ENST00000550331 DIO1P49895 249 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms