RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SLC41A3Q96GZ6 507 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 GLIPR2Q9H4G4 154 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 TREM1Q9NP99 234 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 EXOGQ9Y2C4 368 aaKnown RBP11.24□□□□□ -0.61
VDR-208ENST00000550325 GNB5O14775 395 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 ARL6IP5O75915 188 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 PSMB5P28074 263 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 OMPP47874 163 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 GUCA2BQ16661 112 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 ZNF620Q6ZNG0 422 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 RGMAQ96B86 450 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 S100A16Q96FQ6 103 aaKnown RBP11.24□□□□□ -0.61
VDR-208ENST00000550325 ZNF75AQ96N20 296 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 CAMK1GQ96NX5 476 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 GPR174Q9BXC1 333 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 EXO5Q9H790 373 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 FKRPQ9H9S5 495 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
VDR-208ENST00000550325 ABRACLQ9P1F3 81 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 NLRC5Q86WI3 1866 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 KANTRA0A1W2PQU2 76 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 TMEM200CA6NKL6 621 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 TMPRSS11DO60235 418 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 SELENOFO60613 162 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 RPP14O95059 124 aaKnown RBP11.24□□□□□ -0.61
VDR-208ENST00000550325 CSN2P05814 226 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 MAPK14Q16539 360 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 NIPAL3Q6P499 406 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 RTN4RL1Q86UN2 441 aaPredicted RBP11.24□□□□□ -0.61
VDR-208ENST00000550325 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 OR9A1PQ8NGU1 263 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 FGF11Q92914 225 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 ZNF649Q9BS31 505 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 ANKRD19PQ9H560 264 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
VDR-208ENST00000550325 LOC100509620A0A075B734 347 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 TRAV27A0A087WT01 109 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 TRBV23-1A0A0A0MS06 115 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 CARNS1A5YM72 827 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 GKN3PP0CG01 181 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 SPP1P10451 314 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 SYN1P17600 705 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 HLA-FP30511 346 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 GPNMBQ14956 572 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 AGERQ15109 404 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 FAM26DQ5JW98 314 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 KHDRBS2Q5VWX1 349 aaKnown RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 TSSK4Q6SA08 328 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 SSX6Q7RTT6 188 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 THEM6Q8WUY1 208 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 DVL3Q92997 716 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 PPP1R16AQ96I34 528 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 CWH43Q9H720 699 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 OPN4Q9UHM6 478 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 OR51B4Q9Y5P0 310 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 ZNF705EA8MWA4 302 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 SSX5O60225 188 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 GALR3O60755 368 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 SC5DO75845 299 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 FARS2O95363 451 aaKnown RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 S100A6P06703 90 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 TEAD1P28347 426 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 SLC11A1P49279 550 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 PNLIPRP1P54315 467 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 UBE2NLQ5JXB2 153 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 C22orf39Q6P5X5 142 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 NDUFAF7Q7L592 441 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 TMPRSS9Q7Z410 1059 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 C17orf64Q86WR6 236 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 ACOT11Q8WXI4 607 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 LINC01599Q8WXQ3 324 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 UBE2E3Q969T4 207 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 CD180Q99467 661 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 KLF16Q9BXK1 252 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 POLMQ9NP87 494 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 C14orf105Q9NVL8 296 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 TAS2R5Q9NYW4 299 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 CTSFQ9UBX1 484 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 CDV3Q9UKY7 258 aaKnown RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 NPFFR2Q9Y5X5 522 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 A0A1W2PS29 197 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 RAB19A4D1S5 217 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 FCMRO60667 390 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 PAK4O96013 591 aaPredicted RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 FABP1P07148 127 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 FZD5Q13467 585 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
VDR-208ENST00000550325 FAM98AQ8NCA5 519 aaKnown RBP11.23□□□□□ -0.61
VDR-208ENST00000550325 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms