RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SLC48A1Q6P1K1 146 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 ARSKQ6UWY0 536 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF765Q7L2R6 523 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 LINGO2Q7L985 606 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF671Q8TAW3 534 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 SMPDL3BQ92485 455 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 DERL3Q96Q80 235 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 PRDM7Q9NQW5 492 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 CMC2Q9NRP2 79 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 MGAT4CQ9UBM8 478 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 ST6GALNAC2Q9UJ37 374 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 HCFC2Q9Y5Z7 792 aa12.71□□□□□ -0.38
HDAC7-228ENST00000548938 LINC01553A4QN01 128 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ARPC1BO15143 372 aaKnown RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 RPN2P04844 631 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ATP5A1P25705 553 aaKnown RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 CCR9P51686 369 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 HCCSP53701 268 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 CAMK1Q14012 370 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 TUSC1Q2TAM9 212 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MRM1Q6IN84 353 aaKnown RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ABHD17CQ6PCB6 329 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ADAMTS15Q8TE58 950 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ACTRT3Q9BYD9 372 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 PITHD1Q9GZP4 211 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 HRASLSQ9HDD0 168 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 KRCC1Q9NPI7 259 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MDC1Q14676 2089 aaKnown RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MFSD2BA6NFX1 497 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 POM121CA8CG34 1229 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 TGM6O95932 706 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 GKN3PP0CG01 181 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MYOGP15173 224 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 HTR2AP28223 471 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 RAD52P43351 418 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ARFIP1P53367 373 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 DPTQ07507 201 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MESP2Q0VG99 397 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 CRMP1Q14194 572 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MAPK14Q16539 360 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 SLC25A25Q6KCM7 469 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 TEX19Q8NA77 164 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 FAM98AQ8NCA5 519 aaKnown RBP12.7□□□□□ -0.38
HDAC7-228ENST00000548938 OR6M1Q8NGM8 313 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 MOSPD2Q8NHP6 518 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 PHOSPHO2Q8TCD6 241 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 ST8SIA4Q92187 359 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 SYNPO2LQ9H987 977 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 CLDND1Q9NY35 253 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 EMC3Q9P0I2 261 aa12.7□□□□□ -0.38
HDAC7-228ENST00000548938 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 MOSPD3O75425 235 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 PSMB1P20618 241 aaKnown RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 MPIP34949 423 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 HSD17B2P37059 387 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 NUP62P37198 522 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 PRDX1Q06830 199 aaKnown RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 TMEM35AQ53FP2 167 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 OR2A1Q8NGT9 310 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 ORAI1Q96D31 301 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 OR14A2Q96R54 314 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 LGR4Q9BXB1 951 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 CCDC86Q9H6F5 360 aaKnown RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 RWDD3Q9Y3V2 267 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 WDR45Q9Y484 360 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 PCDHGA9Q9Y5G4 932 aaKnown RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 TRAV27A0A087WT01 109 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 PLSCR5A0PG75 271 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 TUBAL3A6NHL2 446 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 TEX46H3BTG2 121 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 ICAM2P13598 275 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 ADRB3P13945 408 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 NT5EP21589 574 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 ZIC1Q15915 447 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 SFRP5Q5T4F7 317 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 FAAP20Q6NZ36 180 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 ARL14Q8N4G2 192 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 OR52I2Q8NH67 350 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 TMEM239Q8WW34 195 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 LCORQ96JN0 433 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-228ENST00000548938 ZNF681Q96N22 645 aa12.69□□□□□ -0.38
HDAC7-228ENST00000548938 A0A1B0GUH1 482 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 L7N2F9 121 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 CTDSPLO15194 276 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 STX11O75558 287 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 GATBO75879 557 aaKnown RBP12.68□□□□□ -0.38
HDAC7-228ENST00000548938 PRNPP04156 253 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 RHOP08100 348 aa12.68□□□□□ -0.38
HDAC7-228ENST00000548938 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms