RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 AP3D1O14617 1153 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 FMO6PO60774 539 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 NME6O75414 186 aaPredicted RBP18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 OR5F1O95221 314 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 WDPCPO95876 746 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 NID1P14543 1247 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 FUT4P22083 530 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 EPHA2P29317 976 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 UGT2B15P54855 530 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 PSG6Q00889 435 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 ALDH6A1Q02252 535 aaKnown RBP18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 ST3GAL3Q11203 375 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 TRAM2Q15035 370 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 SEC23BQ15437 767 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 KRTCAP3Q53RY4 240 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 KLHL17Q6TDP4 642 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 ZNF836Q6ZNA1 936 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 SIRT6Q8N6T7 355 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 SLC38A4Q969I6 547 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 SLC35B4Q969S0 331 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 MESP1Q9BRJ9 268 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 CRB3Q9BUF7 120 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 VCX3AQ9NNX9 186 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 NECTIN3Q9NQS3 549 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 DLL4Q9NR61 685 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 PLCXD1Q9NUJ7 323 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 SCN3BQ9NY72 215 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 PRODH2Q9UF12 536 aa18.22■□□□□ 0.51
CTDSP2-204ENST00000548823 NSG1A0A0A6YYJ2 146 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 ZAR1LA6NP61 321 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 CYP7B1O75881 506 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 KCNK2O95069 426 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 SERPINA7P05543 415 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 OSMP13725 252 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 IGFBP2P18065 325 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 FBLP22087 321 aaKnown RBP18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 CRISP1P54107 249 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 RGS8P57771 180 aaPredicted RBP18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 ZNF267Q14586 743 aaPredicted RBP18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 GPR68Q15743 365 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 ZBED5Q49AG3 693 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 C1orf94Q6P1W5 598 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 PGBD2Q6P3X8 592 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 PODNL1Q6PEZ8 512 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 NCCRP1Q6ZVX7 275 aaPredicted RBP18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 NDUFAF7Q7L592 441 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 CCDC71Q8IV32 467 aaPredicted RBP18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 CLIP4Q8N3C7 705 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 ZNF615Q8N8J6 731 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 MORN4Q8NDC4 146 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 PIK3R3Q92569 461 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 DUSP21Q9H596 190 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 CCNB1IP1Q9NPC3 277 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 REV1Q9UBZ9 1251 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 RPH3AQ9Y2J0 694 aaPredicted RBP18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 PCDHGB1Q9Y5G3 927 aa18.21■□□□□ 0.51
CTDSP2-204ENST00000548823 OR10H3O60404 316 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 MPZL2O60487 215 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 TPST2O60704 377 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 GSTM3P21266 225 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 MAOAP21397 527 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 IFNGR2P38484 337 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 PSMD4P55036 377 aaKnown RBP18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 TAS2R41P59536 307 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 PMP22Q01453 160 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 TMEM200AQ86VY9 491 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 GRAMD2AQ8IUY3 354 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 ENTHD1Q8IYW4 607 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 ALDH16A1Q8IZ83 802 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 METTL27Q8N6F8 245 aaPredicted RBP18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 RHOXF1Q8NHV9 184 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 DOK4Q8TEW6 326 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 IPCEF1Q8WWN9 437 aaPredicted RBP18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 NINJ1Q92982 152 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 GTPBP3Q969Y2 492 aaKnown RBP18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 GPR137Q96N19 417 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 PTCHD1Q96NR3 888 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 MCHR1Q99705 422 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 OR10A5Q9H207 317 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 MKKSQ9NPJ1 570 aaPredicted RBP18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 CFL2Q9Y281 166 aa18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 GPR55Q9Y2T6 319 aaPredicted RBP18.2■□□□□ 0.5
CTDSP2-204ENST00000548823 GXYLT2A0PJZ3 443 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 CDHR4A6H8M9 788 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 OR5H15A6NDH6 313 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 DYRK3O43781 588 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 CDC123O75794 336 aaPredicted RBP18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 EEF1B2P24534 225 aaKnown RBP18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 SSTR4P31391 388 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 ZNF136P52737 540 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 FOXD4Q12950 439 aaPredicted RBP18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 DECR1Q16698 335 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 ENTPD8Q5MY95 495 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 CCNJQ5T5M9 372 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 RANBP3LQ86VV4 465 aaPredicted RBP18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 OR4K5Q8NGD3 323 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 CNIH3Q8TBE1 160 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 C8orf44Q96CB5 159 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 G6PC3Q9BUM1 346 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms