RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 CRISP3P54108 245 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 MAPK11Q15759 364 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 TMEM201Q5SNT2 666 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 MRPL2Q5T653 305 aaKnown RBP12.94□□□□□ -0.34
SEC23A-204ENST00000548032 AP1ARQ63HQ0 302 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 ZNF550Q7Z398 422 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 VRK2Q86Y07 508 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 CDC20BQ86Y33 519 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 OR52P1PQ8NH57 321 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 SLC38A5Q8WUX1 472 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 TMEM19Q96HH6 336 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 MED18Q9BUE0 208 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 CACYBPQ9HB71 228 aaKnown RBP12.94□□□□□ -0.34
SEC23A-204ENST00000548032 PLSCR4Q9NRQ2 329 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 CALML5Q9NZT1 146 aa12.94□□□□□ -0.34
SEC23A-204ENST00000548032 SPIN1Q9Y657 262 aaPredicted RBP12.94□□□□□ -0.34
SEC23A-204ENST00000548032 ANKHD1Q8IWZ3 2542 aaKnown RBP12.94□□□□□ -0.34
SEC23A-204ENST00000548032 FAM221AA4D161 298 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 CFAP73A6NFT4 308 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 EDF1O60869 148 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 PRKD3O94806 890 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 NID1P14543 1247 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 CD1EP15812 388 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 KLK2P20151 261 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 RPS4Y1P22090 263 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 DNAJA1P31689 397 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 APOBEC1P41238 236 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 RAC3P60763 192 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 RNPS1Q15287 305 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 RGNQ15493 299 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 LIN52Q52LA3 116 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 SYT14P1Q58G82 188 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 PAGE3Q5JUK9 113 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 ANKRD34AQ69YU3 496 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 TUSC5Q8IXB3 177 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 SLC25A43Q8WUT9 341 aaPredicted RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 MAL2Q969L2 176 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 ZC3HAV1LQ96H79 300 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 WFIKKN1Q96NZ8 548 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 CCDC106Q9BWC9 280 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 LIME1Q9H400 295 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 RAD21L1Q9H4I0 556 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 RLIMQ9NVW2 624 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 THUMPD1Q9NXG2 353 aaKnown RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 SLC25A37Q9NYZ2 338 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 SLAMF8Q9P0V8 285 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 KLHL13Q9P2N7 655 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.93□□□□□ -0.34
SEC23A-204ENST00000548032 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 TESMINQ9Y4I5 508 aa12.93□□□□□ -0.34
SEC23A-204ENST00000548032 A0A0G2JND7 137 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 C5orf58C9J3I9 102 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 SULT2B1O00204 365 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 FESP07332 822 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 GKN3PP0CG01 181 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 UQCRBP14927 111 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 CCKARP32238 428 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 DIO1P49895 249 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 TESK1Q15569 626 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 ZNF836Q6ZNA1 936 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 TMPPEQ6ZT21 453 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 NUFIP2Q7Z417 695 aaKnown RBP12.92□□□□□ -0.34
SEC23A-204ENST00000548032 STK32CQ86UX6 486 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 MSRB3Q8IXL7 192 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 PMM1Q92871 262 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 OR11A1Q9GZK7 315 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 C6orf203Q9P0P8 240 aaPredicted RBP12.92□□□□□ -0.34
SEC23A-204ENST00000548032 TRIM33Q9UPN9 1127 aa12.92□□□□□ -0.34
SEC23A-204ENST00000548032 ZNF443Q9Y2A4 671 aaPredicted RBP12.92□□□□□ -0.34
SEC23A-204ENST00000548032 DSPPQ9NZW4 1301 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 TMED7-TICAM2A0A0A6YYA0 188 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 A0A0G2JPF8 293 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HNRNPCL2B2RXH8 293 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HNRNPCL3B7ZW38 293 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 SMAD9O15198 467 aaKnown RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HNRNPCL1O60812 293 aaKnown RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HRGP04196 525 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 YES1P07947 543 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HNRNPCL4P0DMR1 293 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 TACR3P29371 465 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 HTR3AP46098 478 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 POLR2HP52434 150 aaKnown RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 CSNK2A1P68400 391 aaPredicted RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 IRX1P78414 480 aaPredicted RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 RASGEF1BQ0VAM2 473 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 EPS8Q12929 822 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 FADDQ13158 208 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 LARS2Q15031 903 aaKnown RBP12.91□□□□□ -0.34
SEC23A-204ENST00000548032 LRIF1Q5T3J3 769 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 GCNT6Q5T4J0 391 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 BEND4Q6ZU67 534 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
SEC23A-204ENST00000548032 ZNF440Q8IYI8 595 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms