RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GPR171O14626 319 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 DNPH1O43598 174 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 CYTIPO60759 359 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 SNNO75324 88 aaPredicted RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 GCM2O75603 506 aaPredicted RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 H6PDO95479 791 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 CNOT4O95628 575 aaKnown RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 ADAP00813 363 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 IL6P05231 212 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 OR3A2P47893 321 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 DIO1P49895 249 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 MAP2K6P52564 334 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 WDR4P57081 412 aaKnown RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 UFM1P61960 85 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 CHRNEQ04844 493 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 PDK3Q15120 406 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 MAPK14Q16539 360 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 NXNQ6DKJ4 435 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 FRRS1Q6ZNA5 592 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 LRRC74BQ6ZQY2 392 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 Q6ZT83 130 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 BHLHA15Q7RTS1 189 aaPredicted RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 OLIG3Q7RTU3 272 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 MTDHQ86UE4 582 aaKnown RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 ZNF100Q8IYN0 542 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 ZNF611Q8N823 705 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 FAM71CQ8NEG0 241 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 MUCL1Q96DR8 90 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 PSD2Q9BQI7 771 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 POTEKPQ9BYX7 375 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 GSX2Q9BZM3 304 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 CXorf56Q9H5V9 222 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 ESRP2Q9H6T0 727 aaKnown RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 RMND5AQ9H871 391 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 MANSC1Q9H8J5 431 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 MTHFD2LQ9H903 347 aaPredicted RBP8.32□□□□□ -1.08
YBX3-218ENST00000546298 CHRNA9Q9UGM1 479 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 HDGFL3Q9Y3E1 203 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 GPR45Q9Y5Y3 372 aa8.32□□□□□ -1.08
YBX3-218ENST00000546298 HIVEP1P15822 2718 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 IGHV3-15A0A0B4J1V0 119 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 GOLGA8QA0A0J9YX86 632 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 CENPVL1A0A0U1RR11 272 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 GOLGA8OA6NCC3 632 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 AGAP5A6NIR3 686 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 GOLGA8NF8WBI6 632 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 RFXANKO14593 260 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 HS3ST1O14792 307 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 SMAD9O15198 467 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 SLC22A3O75751 556 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 DBIP07108 87 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 CD3EP07766 207 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 ALDOCP09972 364 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 NR2F1P10589 423 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 KITP10721 976 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 IL7RP16871 459 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 EPHA3P29320 983 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 MAGOHP61326 146 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 CAPRIN1Q14444 709 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 TAB1Q15750 504 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 GSTA3Q16772 222 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 PDCD4Q53EL6 469 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 ADAM5Q6NVV9 412 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 YTHDF3Q7Z739 585 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 P2RY8Q86VZ1 359 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 PEX5LQ8IYB4 626 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 ZNF440Q8IYI8 595 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 PIGXQ8TBF5 258 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 MGARPQ8TDB4 240 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 ZNF524Q96C55 264 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 ZG16BQ96DA0 208 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 TEX37Q96LM6 180 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 TMEM204Q9BSN7 226 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 INPP5KQ9BT40 448 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 CCDC106Q9BWC9 280 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 WDR55Q9H6Y2 383 aaPredicted RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 CACYBPQ9HB71 228 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 CTPS2Q9NRF8 586 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 THUMPD1Q9NXG2 353 aaKnown RBP8.31□□□□□ -1.08
YBX3-218ENST00000546298 CALML5Q9NZT1 146 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 ZIM2Q9NZV7 527 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 TRAPPC4Q9Y296 219 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 RNF115Q9Y4L5 304 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 ADGRG4Q8IZF6 3080 aa8.31□□□□□ -1.08
YBX3-218ENST00000546298 MED12LQ86YW9 2145 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 IGKV3D-15A0A087WSY6 115 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 TMEM247A6NEH6 219 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 CFAP73A6NFT4 308 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ZNF814B7Z6K7 855 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 FAAHO00519 579 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 UBDO15205 165 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 CLOCKO15516 846 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ZNF208O43345 1280 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 EIF1BO60739 113 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 ANP32DO95626 131 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 PMS2P2O95744 297 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 GSNP06396 782 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms