RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 KIR2DL1P43626 348 aaPredicted RBP14.09□□□□□ -0.15
CNN3-207ENST00000545882 P2RX3P56373 397 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 PRRT3Q5FWE3 981 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 ZNF613Q6PF04 617 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 LYPD4Q6UWN0 246 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 CDK20Q8IZL9 346 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 OR5T3Q8NGG3 340 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 MED28Q9H204 178 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 CCDC86Q9H6F5 360 aaKnown RBP14.09□□□□□ -0.15
CNN3-207ENST00000545882 PRDM9Q9NQV7 894 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 KLHL1Q9NR64 748 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 NUDT15Q9NV35 164 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 NPFFR2Q9Y5X5 522 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TP53BP1Q12888 1972 aaPredicted RBP14.09□□□□□ -0.15
CNN3-207ENST00000545882 TBC1D3DA0A087WVF3 549 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TBC1D3IA0A087WXS9 549 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 A0A1W2PPK0 400 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 A0A1W2PRG6 482 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 SYNDIG1LA6NDD5 238 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TBC1D3LB9A6J9 549 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 CYR61O00622 381 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 OGG1O15527 345 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TCRBP04435 133 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TBC1D3HP0C7X1 549 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 SNRPBP14678 240 aaKnown RBP14.09□□□□□ -0.15
CNN3-207ENST00000545882 NT5EP21589 574 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 GABRA3P34903 492 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 DGCR2P98153 550 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TP53I3Q53FA7 332 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 HACD4Q5VWC8 232 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TBC1D3CQ6IPX1 549 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 ANKRD54Q6NXT1 300 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 FIGLAQ6QHK4 219 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 ENPP7Q6UWV6 458 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 KRT74Q7RTS7 529 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 SIAH3Q8IW03 269 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TBC1D3Q8IZP1 549 aaPredicted RBP14.09□□□□□ -0.15
CNN3-207ENST00000545882 OR4C6Q8NH72 309 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 SLC2A12Q8TD20 617 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 GPR137Q96N19 417 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 PTCHD1Q96NR3 888 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 ZNF559Q9BR84 538 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 ZNF426Q9BUY5 554 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 CERS4Q9HA82 394 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 REV3LO60673 3130 aa14.09□□□□□ -0.15
CNN3-207ENST00000545882 TRAV1-2A0A0B4J238 106 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 A0A1B0GWA3 101 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 DHFRP00374 187 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 PEPDP12955 493 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 ZNF3P17036 446 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 POLR2CP19387 275 aaPredicted RBP14.08□□□□□ -0.16
CNN3-207ENST00000545882 ACAA2P42765 397 aaKnown RBP14.08□□□□□ -0.16
CNN3-207ENST00000545882 LSSP48449 732 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 EMDP50402 254 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 RPS11P62280 158 aaKnown RBP eCLIP14.08□□□□□ -0.16
CNN3-207ENST00000545882 POU6F2P78424 691 aaPredicted RBP14.08□□□□□ -0.16
CNN3-207ENST00000545882 KIR2DS3Q14952 304 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 RNASE12Q5GAN4 147 aaKnown RBP14.08□□□□□ -0.16
CNN3-207ENST00000545882 DGAT2L6Q6ZPD8 337 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 RD3Q7Z3Z2 195 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 TSACCQ96A04 125 aaPredicted RBP14.08□□□□□ -0.16
CNN3-207ENST00000545882 SLC22A18Q96BI1 424 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 MS4A3Q96HJ5 214 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 CITED4Q96RK1 184 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 DPAGT1Q9H3H5 408 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 TMEM27Q9HBJ8 222 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 LYRM4Q9HD34 91 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 EVA1BQ9NVM1 165 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 DZANK1Q9NVP4 752 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 PCOLCE2Q9UKZ9 415 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 ICAM5Q9UMF0 924 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 CLEC4AQ9UMR7 237 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 NUBP2Q9Y5Y2 271 aa14.08□□□□□ -0.16
CNN3-207ENST00000545882 A6NCN8 305 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 H0Y8X5 98 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 H0YGG7 62 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 GPR75O95800 540 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ANKRD34CP0C6C1 535 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 EPXP11678 715 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 CXCL3P19876 107 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 OR3A3P47888 321 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 MMP15P51511 669 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ARF3P61204 181 aaPredicted RBP14.07□□□□□ -0.16
CNN3-207ENST00000545882 ACTC1P68032 377 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ACTA1P68133 377 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ZCCHC12Q6PEW1 402 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ZC3H14Q6PJT7 736 aaKnown RBP14.07□□□□□ -0.16
CNN3-207ENST00000545882 ESPNLQ6ZVH7 1005 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 HEATR5AQ86XA9 2040 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 MS4A15Q8N5U1 240 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ZNF655Q8N720 491 aaPredicted RBP14.07□□□□□ -0.16
CNN3-207ENST00000545882 OR11H4Q8NGC9 324 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 OR51Q1Q8NH59 317 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 CTHRC1Q96CG8 243 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 PELI1Q96FA3 418 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 KXD1Q9BQD3 176 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 ORAI3Q9BRQ5 295 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 C1QTNF7Q9BXJ2 289 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 EMC7Q9NPA0 242 aa14.07□□□□□ -0.16
CNN3-207ENST00000545882 SERTAD3Q9UJW9 196 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms