RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MRPS2Q9Y399 296 aaKnown RBP2.74□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF175Q9Y473 711 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 SDK1Q7Z5N4 2213 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 PCNX2A6NKB5 2137 aa2.74□□□□□ -1.97
SNHG1-224ENST00000545688 FRMPD4Q14CM0 1322 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 KIAA1671Q9BY89 1806 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 LRIT2A6NDA9 550 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 SLC28A1O00337 649 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 CHEK1O14757 476 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 CXCL14O95715 111 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF806P0C7X5 589 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 GABRR1P24046 479 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 HOXA6P31267 233 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 RPL32P62910 135 aaKnown RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 MRPS6P82932 125 aaKnown RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 YWHAHQ04917 246 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 CSTF1Q05048 431 aaKnown RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 ZKSCAN8Q15776 578 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 IFI44LQ53G44 452 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF691Q5VV52 312 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 NKAIN2Q5VXU1 208 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF57Q68EA5 555 aaPredicted RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 FRA10AC1Q70Z53 315 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 DCAF4L2Q8NA75 395 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 ZNF721Q8TF20 911 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 DNAJB3Q8WWF6 145 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 NLNQ9BYT8 704 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 STARD5Q9NSY2 213 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 LHX3Q9UBR4 397 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 TRMT6Q9UJA5 497 aaKnown RBP2.73□□□□□ -1.97
SNHG1-224ENST00000545688 ENTPD4Q9Y227 616 aa2.73□□□□□ -1.97
SNHG1-224ENST00000545688 TENM4Q6N022 2769 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 ABCB11O95342 1321 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 GSTTP1A0A1W2PQM5 241 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 PSMA7O14818 248 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 WISP3O95389 354 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 IGSF6O95976 241 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 GSTA1P08263 222 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 UROSP10746 265 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 HSPD1P10809 573 aaKnown RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 NPY2RP49146 381 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 DAZ2Q13117 558 aaKnown RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 ELAVL3Q14576 367 aaKnown RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 CLLU1OSQ5K130 101 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 HIST2H2AA3Q6FI13 130 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 RANBP3LQ86VV4 465 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 H1FOOQ8IZA3 346 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 CSNK1A1LQ8N752 337 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 CCDC71LQ8N9Z2 235 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 GOT1L1Q8NHS2 421 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 FIBINQ8TAL6 211 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 FGF14Q92915 247 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 OSBPL8Q9BZF1 889 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 ABCG8Q9H221 673 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 GLIPR2Q9H4G4 154 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 IL1RAPL2Q9NP60 686 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 DAZ3Q9NR90 486 aaKnown RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 STX8Q9UNK0 236 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 LIPT1Q9Y234 373 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 URB1O60287 2271 aaKnown RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 MYH8P13535 1937 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 LOXHD1Q8IVV2 1947 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 MTCL1Q9Y4B5 1905 aaKnown RBP2.72□□□□□ -1.97
SNHG1-224ENST00000545688 MYH4Q9Y623 1939 aa2.72□□□□□ -1.97
SNHG1-224ENST00000545688 SPTAN1Q13813 2472 aaKnown RBP2.71□□□□□ -1.97
SNHG1-224ENST00000545688 CLUHO75153 1309 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 BSNQ9UPA5 3926 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ATMQ13315 3056 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 PATJQ8NI35 1801 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 MGAQ8IWI9 3026 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 RNF113AO15541 343 aaKnown RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 LYPLA1O75608 230 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 SEMG1P04279 462 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 HIST1H2AGP0C0S8 130 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 CSRP1P21291 193 aaKnown RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 SGSHP51688 502 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 TLE4Q04727 773 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 DPYSQ14117 519 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ALX1Q15699 326 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 CDC37Q16543 378 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF630Q2M218 657 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 FUT11Q495W5 492 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 SULT1C3Q6IMI6 304 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ZSCAN25Q6NSZ9 544 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 CWC27Q6UX04 472 aaKnown RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 SYVN1Q86TM6 617 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 PARGQ86W56 976 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 FAM228AQ86W67 206 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ECHDC2Q86YB7 292 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 LRRC43Q8N309 656 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 ZNF561Q8N587 486 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 RSPH1Q8WYR4 309 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 HIST1H2ACQ93077 130 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 SLC35E1Q96K37 410 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 BOLA2Q9H3K6 86 aa2.71□□□□□ -1.98
SNHG1-224ENST00000545688 AKIRIN1Q9H9L7 192 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 COPS7BQ9H9Q2 264 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-224ENST00000545688 TRPV5Q9NQA5 729 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms