RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 M0R1B8 84 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PLPP1O14494 284 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TNFSF11O14788 317 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SCO2O43819 266 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TSPAN2O60636 221 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GUCY1B2O75343 617 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 STK16O75716 305 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 IPO7O95373 1038 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ATP1B1P05026 303 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GRPP07492 148 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZSCAN5DPP0CG00 497 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CPMP14384 443 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 DAOP14920 347 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF37AP17032 561 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CSNK2A2P19784 350 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 COX5AP20674 150 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 S1PR1P21453 382 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PAX7P23759 505 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PRTN3P24158 256 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 IL2RGP31785 369 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GGT5P36269 586 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OR3A2P47893 321 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF83P51522 516 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 IDH3GP51553 393 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 XKP51811 444 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PSMD4P55036 377 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 UCP3P55916 312 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CARD18P57730 90 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 RPS16P62249 146 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 MXRA7P84157 204 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 NHLH2Q02577 135 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SPOCK1Q08629 439 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 C17orf67Q0P5P2 114 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 STX5Q13190 355 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CHIT1Q13231 466 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 RAB32Q13637 225 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CCNIQ14094 377 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 E2F2Q14209 437 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ICAM4Q14773 271 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 KRT72Q14CN4 511 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TGFBIQ15582 683 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF239Q16600 458 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TMEM44Q2T9K0 475 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PRICKLE4Q2TBC4 344 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 HSP90AA5PQ58FG0 334 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 FAM209BQ5JX69 171 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 VAX1Q5SQQ9 334 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 RBM20Q5T481 1227 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 LGSNQ5TDP6 509 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SEL1L2Q5TEA6 688 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OR7E24Q6IFN5 339 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ADNP2Q6IQ32 1131 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 FAHD2BQ6P2I3 314 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 RAD9BQ6WBX8 426 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 C17orf107Q6ZR85 190 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 Q6ZRM9 215 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 FCRLAQ7L513 359 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GSTA5Q7RTV2 222 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PEX26Q7Z412 305 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 NUFIP2Q7Z417 695 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 C1QL2Q7Z5L3 287 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 LUZP1Q86V48 1076 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 NUDT13Q86X67 352 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CNGA4Q8IV77 575 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TUSC5Q8IXB3 177 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CCDC170Q8IYT3 715 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF786Q8N393 782 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TXLNBQ8N3L3 684 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 GTPBP8Q8N3Z3 284 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PDPRQ8NCN5 879 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OR52R1Q8NGF1 315 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OR5M1Q8NGP8 315 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 NANPQ8TBE9 248 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ATG4AQ8WYN0 398 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OSTF1Q92882 214 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ERP27Q96DN0 273 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 FAHD2AQ96GK7 314 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 KLHL15Q96M94 604 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CCT8L2Q96SF2 557 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SLC6A7Q99884 636 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SPATA5L1Q9BVQ7 753 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 SORBS1Q9BX66 1292 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 RSPO3Q9BXY4 272 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OR51B5Q9H339 312 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 DDX31Q9H8H2 851 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 XAB2Q9HCS7 855 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 MRPS18AQ9NVS2 196 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 FAM120CQ9NX05 1096 aaKnown RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ETAA1Q9NY74 926 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TAS2R16Q9NYV7 291 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 MED11Q9P086 117 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 KLHL9Q9P2J3 617 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 CTNNAL1Q9UBT7 734 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF639Q9UID6 485 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 KLHL21Q9UJP4 597 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 ING1Q9UK53 422 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-220ENST00000544550 PSME2Q9UL46 239 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 TSC22D4Q9Y3Q8 395 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 OR10H1Q9Y4A9 318 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms