RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 OR56A3Q8NH54 315 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 BRIX1Q8TDN6 353 aaKnown RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 STK35Q8TDR2 534 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PTDSS2Q9BVG9 487 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 PBX4Q9BYU1 374 aa11.76□□□□□ -0.53
SMG8-202ENST00000543872 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 WSB2Q9NYS7 404 aaPredicted RBP11.76□□□□□ -0.53
SMG8-202ENST00000543872 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 POM121BA6NF01 834 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 OMPP47874 163 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 LUMP51884 338 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 TMEM44Q2T9K0 475 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ZNF311Q5JNZ3 666 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 C9orf152Q5JTZ5 239 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 MEPCEQ7L2J0 689 aaKnown RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 ADCK2Q7Z695 626 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 STX12Q86Y82 276 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 OR14A16Q8NHC5 309 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 IL17FQ96PD4 163 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 MS4A4EQ96PG1 132 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 OR14A2Q96R54 314 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 SPSB2Q99619 263 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ZNF471Q9BX82 626 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 UBQLN3Q9H347 655 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ASF1BQ9NVP2 202 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 SPHK1Q9NYA1 384 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 AKAP7Q9P0M2 348 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 CXXC1Q9P0U4 656 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 ERAL1O75616 437 aaKnown RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 STATHP02808 62 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 SAGP10523 405 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 TYRP14679 529 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 TRHRP34981 398 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 GJA5P36382 358 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 SPINT3P49223 89 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 CCL14Q16627 93 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 DNAJB7Q7Z6W7 309 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 MRGPREQ86SM8 312 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ZNF546Q86UE3 836 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 DMRTC2Q8IXT2 367 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 SPAG16Q8N0X2 631 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 TMEM255BQ8WV15 326 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 EFCAB11Q9BUY7 163 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ENKD1Q9H0I2 346 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 SLC25A32Q9H2D1 315 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 FN3KQ9H479 309 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 SIRT3Q9NTG7 399 aaPredicted RBP11.75□□□□□ -0.53
SMG8-202ENST00000543872 MOKQ9UQ07 419 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 ARID1AO14497 2285 aa11.75□□□□□ -0.53
SMG8-202ENST00000543872 A0A1B0GV90 55 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 CDC42EP2O14613 210 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 CPN1P15169 458 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 NDUFV2P19404 249 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 RFC3P40938 356 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 CTSOP43234 321 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 BLOC1S1P78537 153 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 STX4Q12846 297 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 GPNMBQ14956 572 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 MAPK14Q16539 360 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 C4orf46Q504U0 113 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 FAM83HQ6ZRV2 1179 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 FBXL4Q9UKA2 621 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 KCNE3Q9Y6H6 103 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 ZNF840PA6NDX5 716 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 SCAMP1O15126 338 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 PLPP2O43688 288 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 GSTZ1O43708 216 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 ZDHHC11BP0C7U3 371 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 CNR1P21554 472 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 NOS3P29474 1203 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 ST3GAL3Q11203 375 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 TMEM69Q5SWH9 247 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 SVBPQ8N300 66 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 SMPDL3BQ92485 455 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 C16orf58Q96GQ5 468 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 MBD2Q9UBB5 411 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 ZMIZ1Q9ULJ6 1067 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 PLAGL1Q9UM63 463 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 KPNA3O00505 521 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 PRKRAO75569 313 aaKnown RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 SLCO2B1O94956 709 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 LY86O95711 162 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 SMIM6P0DI80 62 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 RGS8P57771 180 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 HYAL4Q2M3T9 481 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 POM121L1PQ3SYA9 428 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 TSSK4Q6SA08 328 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 PRSS55Q6UWB4 352 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 MUC20Q8N307 709 aaPredicted RBP11.74□□□□□ -0.53
SMG8-202ENST00000543872 OR2AK2Q8NG84 335 aa11.74□□□□□ -0.53
SMG8-202ENST00000543872 OR51L1Q8NGJ5 315 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms