RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OR1Q1Q15612 314 aa11□□□□□ -0.65
DDX55-210ENST00000543016 C3orf33Q6P1S2 294 aa11□□□□□ -0.65
DDX55-210ENST00000543016 ESPNLQ6ZVH7 1005 aa11□□□□□ -0.65
DDX55-210ENST00000543016 CYP4Z1Q86W10 505 aa11□□□□□ -0.65
DDX55-210ENST00000543016 CADM2Q8N3J6 435 aa11□□□□□ -0.65
DDX55-210ENST00000543016 CCDC124Q96CT7 223 aaKnown RBP11□□□□□ -0.65
DDX55-210ENST00000543016 MPP4Q96JB8 637 aa11□□□□□ -0.65
DDX55-210ENST00000543016 HSH2DQ96JZ2 352 aa11□□□□□ -0.65
DDX55-210ENST00000543016 CLPTM1LQ96KA5 538 aa11□□□□□ -0.65
DDX55-210ENST00000543016 MAGIXQ9H6Y5 334 aa11□□□□□ -0.65
DDX55-210ENST00000543016 SPRR3Q9UBC9 169 aa11□□□□□ -0.65
DDX55-210ENST00000543016 CHRNA9Q9UGM1 479 aa11□□□□□ -0.65
DDX55-210ENST00000543016 SLC7A8Q9UHI5 535 aa11□□□□□ -0.65
DDX55-210ENST00000543016 POMPQ9Y244 141 aa11□□□□□ -0.65
DDX55-210ENST00000543016 SLC6A5Q9Y345 797 aa11□□□□□ -0.65
DDX55-210ENST00000543016 ZNF337Q9Y3M9 751 aa11□□□□□ -0.65
DDX55-210ENST00000543016 SHANK1Q9Y566 2161 aa11□□□□□ -0.65
DDX55-210ENST00000543016 A0A0B4J2E0 115 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 A0A1B0GWA3 101 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 A0A1B0GX12 115 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 TRAPPC13A5PLN9 417 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 HTR3EA5X5Y0 456 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 NPIPA2E9PIF3 369 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 NPIPA3F8WFD2 350 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 M0R3H8 397 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 ADAMDEC1O15204 470 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 FRS3O43559 492 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 CIB2O75838 187 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 PRKD3O94806 890 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 OR5F1O95221 314 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 CXCR1P25024 350 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 TACR3P29371 465 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 LHX2P50458 406 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 FLOT2Q14254 428 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 ZSCAN26Q16670 478 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 GXYLT1Q4G148 440 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 CHMP1BQ7LBR1 199 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 ATG4DQ86TL0 474 aaPredicted RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 COMTD1Q86VU5 262 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 ADGRG3Q86Y34 549 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 CHERPQ8IWX8 916 aaKnown RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 C10orf67Q8IYJ2 551 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 LILRA2Q8N149 483 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 VANGL1Q8TAA9 524 aaPredicted RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 ZPLD1Q8TCW7 415 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 PHF10Q8WUB8 498 aaKnown RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 SLC38A4Q969I6 547 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 C3orf49Q96BT1 292 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 WDYHV1Q96HA8 205 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 PRRC1Q96M27 445 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 RAB3IPQ96QF0 476 aaPredicted RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 POTEKPQ9BYX7 375 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 TP63Q9H3D4 680 aaPredicted RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 TIGARQ9NQ88 270 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 HDGFL3Q9Y3E1 203 aa10.99□□□□□ -0.65
DDX55-210ENST00000543016 FAM32AQ9Y421 112 aaKnown RBP10.99□□□□□ -0.65
DDX55-210ENST00000543016 PCNX3Q9H6A9 2034 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 TMED7-TICAM2A0A0A6YYA0 188 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ELOA3DA6NLF2 546 aaPredicted RBP10.98□□□□□ -0.65
DDX55-210ENST00000543016 A8MVM7 634 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 H3BML4 177 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 DNPH1O43598 174 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 CHP2O43745 196 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 TPST2O60704 377 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 GPIP06744 558 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 TPOP07202 933 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 STSP08842 583 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 FREM3P0C091 2139 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 RHCEP18577 417 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 HTR2AP28223 471 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 CLDN18P56856 261 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 SMIM11AP58511 58 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 TAS2R41P59536 307 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 HSF1Q00613 529 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ST3GAL3Q11203 375 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 NPTX1Q15818 432 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ELOA3BQ3SY89 546 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 FAM98BQ52LJ0 330 aaKnown RBP10.98□□□□□ -0.65
DDX55-210ENST00000543016 ALG10BQ5I7T1 473 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ENTPD8Q5MY95 495 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 CYP2R1Q6VVX0 501 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 PIWIL3Q7Z3Z3 882 aaKnown RBP10.98□□□□□ -0.65
DDX55-210ENST00000543016 FGD2Q7Z6J4 655 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 VTCN1Q7Z7D3 282 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ZGRF1Q86YA3 2104 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ELOA3Q8NG57 546 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 STK35Q8TDR2 534 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ADAMTS16Q8TE57 1224 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 KLHL15Q96M94 604 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 HS6ST2Q96MM7 605 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 UCN2Q96RP3 112 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ZNF347Q96SE7 839 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 KLHDC3Q9BQ90 382 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 SLC19A3Q9BZV2 496 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 ANKRD19PQ9H560 264 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 YY1AP1Q9H869 796 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 IL1RAPQ9NPH3 570 aa10.98□□□□□ -0.65
DDX55-210ENST00000543016 CTPS2Q9NRF8 586 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms