RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GRINA	Q7Z429	371 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RETREG3	Q86VR2	466 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	VRK2	Q86Y07	508 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZZZ3	Q8IYH5	903 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ATP6V1C2	Q8NEY4	427 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	OR52P1P	Q8NH57	321 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MAL2	Q969L2	176 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CTPS2	Q9NRF8	586 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PLSCR4	Q9NRQ2	329 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SERINC1	Q9NRX5	453 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RLIM	Q9NVW2	624 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	LEF1	Q9UJU2	399 aa	Predicted RBP	13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CHST2	Q9Y4C5	530 aa		13.81	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TMEM247	A6NEH6	219 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TUBAL3	A6NHL2	446 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CTAG2	O75638	210 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PABPC4L	P0CB38	370 aa	Known RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TROVE2	P10155	538 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ARAF	P10398	606 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FKBP2	P26885	142 aa	Known RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SLC7A1	P30825	629 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ACAA2	P42765	397 aa	Known RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CPA2	P48052	419 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	IDH2	P48735	452 aa	Known RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	EPS8	Q12929	822 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	DAZAP2	Q15038	168 aa	Predicted RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZSWIM7	Q19AV6	140 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	LIN52	Q52LA3	116 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RUNDC3A	Q59EK9	446 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GTF2IRD2B	Q6EKJ0	949 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF836	Q6ZNA1	936 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GTF2IRD2	Q86UP8	949 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ADGRG3	Q86Y34	549 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF440	Q8IYI8	595 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF610	Q8N9Z0	462 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	OR6K3	Q8NGY3	331 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF563	Q8TA94	476 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ROBO4	Q8WZ75	1007 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GP6	Q9HCN6	339 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CHRNA9	Q9UGM1	479 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CLEC4A	Q9UMR7	237 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	NDUFAF1	Q9Y375	327 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552	EMC9	Q9Y3B6	208 aa		13.8	□□□□□ -0.2
ECHDC2-223	ENST00000542552		A0A1W2PNR3	127 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CFAP73	A6NFT4	308 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PGM3	O95394	542 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	VIM	P08670	466 aa	Known RBP	13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	EPX	P11678	715 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CD79B	P40259	229 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SLC1A3	P43003	542 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	HTR3A	P46098	478 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CLK1	P49759	484 aa	Known RBP	13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ARFIP2	P53365	341 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FAM27E3	Q08E93	113 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	LARS2	Q15031	903 aa	Known RBP	13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RNPS1	Q15287	305 aa	Known RBP	13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ADRM1	Q16186	407 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SYT14P1	Q58G82	188 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PPP4R4	Q6NUP7	873 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CLIP4	Q8N3C7	705 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	BBS10	Q8TAM1	723 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	LINC01560	Q8TB33	94 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ABHD3	Q8WU67	409 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	OR5B2	Q96R09	309 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SPATA9	Q9BWV2	254 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ADAM19	Q9H013	955 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TMEM38A	Q9H6F2	299 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ELOVL5	Q9NYP7	299 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ING1	Q9UK53	422 aa	Predicted RBP	13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PROCR	Q9UNN8	238 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF232	Q9UNY5	417 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CORO2B	Q9UQ03	480 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	IFT52	Q9Y366	437 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CELSR1	Q9NYQ6	3014 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CCDC168	Q8NDH2	2452 aa		13.79	□□□□□ -0.2
ECHDC2-223	ENST00000542552	EVPLL	A8MZ36	301 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PRKD3	O94806	890 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	PLG	P00747	810 aa	Predicted RBP	13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ETS2	P15036	469 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ENPP1	P22413	925 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	AGTR1	P30556	359 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MDH1	P40925	334 aa	Known RBP	13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	CTBP2	P56545	445 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	GCNT6	Q5T4J0	391 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	TMPPE	Q6ZT21	453 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	FCRLA	Q7L513	359 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	DHDDS	Q86SQ9	333 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SLC43A2	Q8N370	569 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ANKRD27	Q96NW4	1050 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	DACH2	Q96NX9	599 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	SLC39A3	Q9BRY0	314 aa		13.78	□□□□□ -0.2
ECHDC2-223	ENST00000542552	MRGBP	Q9NV56	204 aa		13.78	□□□□□ -0.2

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