RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 CFAP73A6NFT4 308 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 C5orf58C9J3I9 102 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 SS18L1O75177 396 aaPredicted RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 PGM3O95394 542 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 PLGP00747 810 aaPredicted RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 CGAP01215 116 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 ARAFP10398 606 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 CD8BP10966 210 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 UQCRBP14927 111 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 HTR3AP46098 478 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 CPA2P48052 419 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 PCYT1AP49585 367 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 SIRPAP78324 504 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 ZNF239Q16600 458 aaKnown RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 RUNDC3AQ59EK9 446 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 GCNT6Q5T4J0 391 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 RNF220Q5VTB9 566 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 ZNF836Q6ZNA1 936 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 DHDDSQ86SQ9 333 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 RETREG3Q86VR2 466 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 SLC25A43Q8WUT9 341 aaPredicted RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 REXO5Q96IC2 774 aaKnown RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 ZNF317Q96PQ6 595 aaPredicted RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 SRXN1Q9BYN0 137 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 IKZF5Q9H5V7 419 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 ARMC7Q9H6L4 198 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 MCCC2Q9HCC0 563 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 RLIMQ9NVW2 624 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 GALNT8Q9NY28 637 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 KLHL14Q9P2G3 628 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 ZNF443Q9Y2A4 671 aaPredicted RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 EMC9Q9Y3B6 208 aa17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 SPIN1Q9Y657 262 aaPredicted RBP17.97■□□□□ 0.47
CACNA2D4-215ENST00000542340 AP3D1O14617 1153 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 SMNDC1O75940 238 aaKnown RBP eCLIP17.96■□□□□ 0.474e-7■■■□□ 17.2
CACNA2D4-215ENST00000542340 ETS2P15036 469 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 RAC3P60763 192 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 EPS8Q12929 822 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 SNTB1Q13884 538 aaKnown RBP17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 C10orf111Q8N326 155 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 RNF128Q8TEB7 428 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 FAM222BQ8WU58 562 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 ROBO4Q8WZ75 1007 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 ANKRD27Q96NW4 1050 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 CGREF1Q99674 301 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 CPPED1Q9BRF8 314 aaPredicted RBP17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 SPATA9Q9BWV2 254 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 TMEM38AQ9H6F2 299 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 CTPS2Q9NRF8 586 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 CHRNA9Q9UGM1 479 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 TACC2O95359 2948 aa17.96■□□□□ 0.47
CACNA2D4-215ENST00000542340 TUBAL3A6NHL2 446 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 SLC1A3P43003 542 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CLK1P49759 484 aaKnown RBP17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CTBP2P56545 445 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CDK6Q00534 326 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 SF3A3Q12874 501 aaKnown RBP eCLIP17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 NFYCQ13952 458 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 RNPS1Q15287 305 aaKnown RBP17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 SYT14P1Q58G82 188 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 ZNF311Q5JNZ3 666 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 REEP3Q6NUK4 255 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 ADGRG3Q86Y34 549 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CLIP4Q8N3C7 705 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 OR6K3Q8NGY3 331 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 NFKBIDQ8NI38 313 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 OR5B2Q96R09 309 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 SAR1AQ9NR31 198 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 PLSCR4Q9NRQ2 329 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CRIM1Q9NZV1 1036 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CLEC4AQ9UMR7 237 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 PROCRQ9UNN8 238 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 CHST2Q9Y4C5 530 aa17.95■□□□□ 0.46
CACNA2D4-215ENST00000542340 A0A1W2PNR3 127 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ADSLP30566 484 aaPredicted RBP17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ACAA2P42765 397 aaKnown RBP17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 MAP2K6P52564 334 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 KLF10Q13118 480 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ADRM1Q16186 407 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ZNF474Q6S9Z5 364 aaPredicted RBP17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 TMPPEQ6ZT21 453 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 FCRLAQ7L513 359 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ZNF550Q7Z398 422 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 SLC43A2Q8N370 569 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ZNF610Q8N9Z0 462 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 SLC35B4Q969S0 331 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 SLC39A3Q9BRY0 314 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 OPN3Q9H1Y3 402 aaPredicted RBP17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 GP6Q9HCN6 339 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 ELOVL5Q9NYP7 299 aa17.94■□□□□ 0.46
CACNA2D4-215ENST00000542340 PRKD3O94806 890 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 TFPIP10646 304 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 SLC6A2P23975 617 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 POLR2HP52434 150 aaKnown RBP17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 CSNK2A1P68400 391 aaPredicted RBP17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 COQ5Q5HYK3 327 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 KRT73Q86Y46 540 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 ZZZ3Q8IYH5 903 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 ABHD3Q8WU67 409 aa17.93■□□□□ 0.46
CACNA2D4-215ENST00000542340 LURAP1Q96LR2 239 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms