RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PLSCR3Q9NRY6 295 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 FBXO34Q9NWN3 711 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 NPIPA5E9PKD4 350 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 CEACAM5P06731 702 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 ATF4P18848 351 aaPredicted RBP14.96□□□□□ -0.01
VARS2-212ENST00000542001 PITPNBP48739 271 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 KIR2DS3Q14952 304 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 NANOGP1Q8N7R0 232 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 BOLLQ8N9W6 283 aaKnown RBP14.96□□□□□ -0.01
VARS2-212ENST00000542001 OR4D11Q8NGI4 311 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 FAM174AQ8TBP5 190 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 NEK7Q8TDX7 302 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 FAM46BQ96A09 425 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 OR2B2Q9GZK3 357 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 DZANK1Q9NVP4 752 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 CD207Q9UJ71 328 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 NPIPA1Q9UND3 350 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 CHST2Q9Y4C5 530 aa14.96□□□□□ -0.01
VARS2-212ENST00000542001 IL1AP01583 271 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 PTH2RP49190 550 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 PDE7AQ13946 482 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 TMEM52BQ4KMG9 183 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 ZNF836Q6ZNA1 936 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 CCDC120Q96HB5 630 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.02
VARS2-212ENST00000542001 ULBP3Q9BZM4 244 aa14.96□□□□□ -0.02
VARS2-212ENST00000542001 TCEAL2Q9H3H9 227 aaPredicted RBP14.96□□□□□ -0.02
VARS2-212ENST00000542001 MRPS14O60783 128 aaKnown RBP14.95□□□□□ -0.02
VARS2-212ENST00000542001 APBB3O95704 486 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 MYF5P13349 255 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 PGAM2P15259 253 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 CCR6P51684 374 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 FOXK2Q01167 660 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 ALG10Q5BKT4 473 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 ZCCHC12Q6PEW1 402 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 FCRLAQ7L513 359 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 MFSD9Q8NBP5 474 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 NPRL2Q8WTW4 380 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 SLC6A20Q9NP91 592 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 OSGIN1Q9UJX0 560 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 NOP16Q9Y3C1 178 aaKnown RBP14.95□□□□□ -0.02
VARS2-212ENST00000542001 ALG5Q9Y673 324 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 RLFQ13129 1914 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 HYKKA2RU49 373 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 HBQ1P09105 142 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 RPS5P46782 204 aaKnown RBP14.95□□□□□ -0.02
VARS2-212ENST00000542001 TAS2R43P59537 309 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 KCNAB1Q14722 419 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 SLC35F2Q8IXU6 374 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 OR4N2Q8NGD1 307 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 FCAMRQ8WWV6 532 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 ZNF775Q96BV0 537 aaPredicted RBP14.95□□□□□ -0.02
VARS2-212ENST00000542001 SDF2Q99470 211 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 IFT46Q9NQC8 304 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 POT1Q9NUX5 634 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 GMEB2Q9UKD1 530 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 DIMT1Q9UNQ2 313 aaKnown RBP14.95□□□□□ -0.02
VARS2-212ENST00000542001 SCN10AQ9Y5Y9 1956 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 SLC19A2O60779 497 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 PKLRP30613 574 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 UQCRC1P31930 480 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 CTHP32929 405 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 ZP2Q05996 745 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 TMEM196Q5HYL7 178 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 FTMTQ8N4E7 242 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 TMEM41AQ96HV5 264 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 Q96M85 177 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 G6PC3Q9BUM1 346 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 ING1Q9UK53 422 aaPredicted RBP14.95□□□□□ -0.02
VARS2-212ENST00000542001 SLC6A5Q9Y345 797 aa14.95□□□□□ -0.02
VARS2-212ENST00000542001 A0A1W2PPL8 197 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 FFAR1O14842 300 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 ANXA3P12429 323 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 CSNK1EP49674 416 aaKnown RBP14.94□□□□□ -0.02
VARS2-212ENST00000542001 GPR143P51810 404 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 NRG3P56975 720 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 BTG2P78543 158 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 SELENBP1Q13228 472 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 AGBL4Q5VU57 503 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 POGLUT1Q8NBL1 392 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 ITPKCQ96DU7 683 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 WFDC6Q9BQY6 131 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 NUDT22Q9BRQ3 303 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 PLA2G2FQ9BZM2 168 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 GABARAPL1Q9H0R8 117 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 METTL7AQ9H8H3 244 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 FKBP14Q9NWM8 211 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 RCE1Q9Y256 329 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 GPR89AB7ZAQ6 455 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 GPR89BP0CG08 455 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 OPRD1P41143 372 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 RUNX2Q13950 521 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 LPAL2Q16609 132 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 DMRTC1Q5HYR2 192 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 RASGRP3Q8IV61 690 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 HDAC8Q9BY41 377 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 FBXL4Q9UKA2 621 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 GPR179Q6PRD1 2367 aa14.94□□□□□ -0.02
VARS2-212ENST00000542001 A0A0J9YY10 115 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms