RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 SKP2Q13309 424 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 STK11Q15831 433 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 SYT14P1Q58G82 188 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 FBXW9Q5XUX1 488 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 OR7E24Q6IFN5 339 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 TMEM108Q6UXF1 575 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 CXXC5Q7LFL8 322 aaKnown RBP13.21□□□□□ -0.29
ITM2C-208ENST00000541852 C16orf62Q7Z3J2 963 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 KRTCAP2Q8N6L1 136 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 OR5D16Q8NGK9 328 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 AGR3Q8TD06 166 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 PMM1Q92871 262 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 TRAF4Q9BUZ4 470 aaPredicted RBP13.21□□□□□ -0.29
ITM2C-208ENST00000541852 MECRQ9BV79 373 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 ZNF350Q9GZX5 532 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 LGALS13Q9UHV8 139 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 TRAPPC4Q9Y296 219 aa13.21□□□□□ -0.29
ITM2C-208ENST00000541852 PRSS51A0A1B0GVH4 220 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 CIB4A0PJX0 185 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 SMAD9O15198 467 aaKnown RBP13.2□□□□□ -0.3
ITM2C-208ENST00000541852 CD5LO43866 347 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 FCMRO60667 390 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 UGT2B17O75795 530 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 PMS2P2O95744 297 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 BPGMP07738 259 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 BMP4P12644 408 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 UQCRC2P22695 453 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 IGHV1-2P23083 117 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 ACVR1BP36896 505 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 HTR3AP46098 478 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
ITM2C-208ENST00000541852 NDUFAF6Q330K2 333 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 DNM1P46Q6ZS02 220 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 ZNF433Q8N7K0 673 aaPredicted RBP13.2□□□□□ -0.3
ITM2C-208ENST00000541852 OR5AK3PQ8NH89 298 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 ZNF563Q8TA94 476 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 PIGXQ8TBF5 258 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 SLC35G5Q96KT7 338 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.2□□□□□ -0.3
ITM2C-208ENST00000541852 PARPBPQ9NWS1 579 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 ASB6Q9NWX5 421 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 SLC17A7Q9P2U7 560 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 GIMAP2Q9UG22 337 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 PRSS50Q9UI38 385 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 MKLN1Q9UL63 735 aa13.2□□□□□ -0.3
ITM2C-208ENST00000541852 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.2□□□□□ -0.3
ITM2C-208ENST00000541852 NOSIPQ9Y314 301 aaKnown RBP13.2□□□□□ -0.3
ITM2C-208ENST00000541852 SONP18583 2426 aaKnown RBP13.19□□□□□ -0.3
ITM2C-208ENST00000541852 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 SHISA9B4DS77 424 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 C9JVG2 144 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 EIF1BO60739 113 aaKnown RBP13.19□□□□□ -0.3
ITM2C-208ENST00000541852 SPAG7O75391 227 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 CD8AP01732 235 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 UBTFL6P0CB48 400 aaPredicted RBP13.19□□□□□ -0.3
ITM2C-208ENST00000541852 TFPIP10646 304 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 CDKN1AP38936 164 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 FAPQ12884 760 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 DPY19L1Q2PZI1 675 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 SEZ6L2Q6UXD5 910 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 GRINAQ7Z429 371 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 NUDCD3Q8IVD9 361 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 LRRC34Q8IZ02 419 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 UBE2J2Q8N2K1 259 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 KBTBD8Q8NFY9 601 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 OR2W6PQ8NHA6 318 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 XAGE5Q8WWM1 108 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 NEUROG1Q92886 237 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 APH1AQ96BI3 265 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 ZNF775Q96BV0 537 aaPredicted RBP13.19□□□□□ -0.3
ITM2C-208ENST00000541852 ZNF300Q96RE9 604 aaPredicted RBP13.19□□□□□ -0.3
ITM2C-208ENST00000541852 DPY30Q9C005 99 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 EXOSC3Q9NQT5 275 aaKnown RBP13.19□□□□□ -0.3
ITM2C-208ENST00000541852 CHRNA9Q9UGM1 479 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 ADAM21Q9UKJ8 722 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 WDR45Q9Y484 360 aa13.19□□□□□ -0.3
ITM2C-208ENST00000541852 CCT8L1PA6NM43 557 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 ABCD4O14678 606 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 RAMP1O60894 148 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 MRPL33O75394 65 aaKnown RBP13.18□□□□□ -0.3
ITM2C-208ENST00000541852 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
ITM2C-208ENST00000541852 H6PDO95479 791 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 IGHV4-39P01824 125 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 MYZAPP0CAP1 466 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 DHRS4L1P0CG22 281 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 PAX7P23759 505 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 TTKP33981 857 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 PGM1P36871 562 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 MAGEA8P43361 318 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
ITM2C-208ENST00000541852 ANXA11P50995 505 aaKnown RBP13.18□□□□□ -0.3
ITM2C-208ENST00000541852 SLC16A1P53985 500 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 CDH11P55287 796 aa13.18□□□□□ -0.3
ITM2C-208ENST00000541852 TGFBR3Q03167 851 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms