RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RGMAQ96B86 450 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 NDC1Q9BTX1 674 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 C1QTNF7Q9BXJ2 289 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 C1QTNF2Q9BXJ5 285 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 CACNG6Q9BXT2 260 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SLC6A16Q9GZN6 736 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 NRSN2Q9GZP1 204 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SPRTNQ9H040 489 aaPredicted RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 SAP130Q9H0E3 1048 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ZNF224Q9NZL3 707 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 SLC23A1Q9UHI7 598 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 A4GNTQ9UNA3 340 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 ZFR2Q9UPR6 939 aaKnown RBP9.66□□□□□ -0.86
CHFR-219ENST00000541341 TMEM5Q9Y2B1 443 aa9.66□□□□□ -0.86
CHFR-219ENST00000541341 PMS2P1A4D2B8 440 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 SNRPGP15A8MWD9 76 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 PRAMEF26H0Y7S4 382 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 FFAR1O14842 300 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 RNF13O43567 381 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 SSNA1O43805 119 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 TSC22D2O75157 780 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 OR5F1O95221 314 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 GIPP09681 153 aaPredicted RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 ELFN1P0C7U0 828 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 LIMS3P0CW19 117 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 LIMS4P0CW20 117 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 C6P13671 934 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 NAGAP17050 411 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 NAT1P18440 290 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 CELP19835 753 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 MMP11P24347 488 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 ACP1P24666 158 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 TSFMP43897 325 aaKnown RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 SCAND1P57086 179 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 TAS2R41P59536 307 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 PRR5P85299 388 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 DHODHQ02127 395 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 TLE3Q04726 772 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 DPTQ07507 201 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 LY6DQ14210 128 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 ZNF322Q6U7Q0 402 aaPredicted RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 FAM198BQ6UWH4 519 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 SLC22A18ASQ8N1D0 253 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 ZNF655Q8N720 491 aaPredicted RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 ZNF485Q8NCK3 441 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 OR2T33Q8NG76 320 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 ACOT11Q8WXI4 607 aaPredicted RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 SLC9A6Q92581 669 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 NEIL2Q969S2 332 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 CIDECQ96AQ7 238 aaPredicted RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 DTD2Q96FN9 168 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 LINC00615Q96LM1 132 aaPredicted RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 GFM1Q96RP9 751 aaKnown RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 BEX2Q9BXY8 128 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 SEMA4CQ9C0C4 833 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 NARFLQ9H6Q4 476 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 ERVMER34-1Q9H9K5 563 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 IMP3Q9NV31 184 aaKnown RBP9.65□□□□□ -0.86
CHFR-219ENST00000541341 MED11Q9P086 117 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 FBXW2Q9UKT8 454 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 GPR34Q9UPC5 381 aa9.65□□□□□ -0.86
CHFR-219ENST00000541341 LOC102723532A0A0G2JNH3 316 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 A0A0X1KG70 313 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 A0A1B0GUH1 482 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 A0A1W2PPL8 197 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 CPED1A4D0V7 1026 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PRAMEF25A6NGN4 478 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ZNF879B4DU55 563 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PRR23D1E9PI22 279 aaPredicted RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 GTPBP1O00178 669 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 CDK2AP1O14519 115 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 KLK10O43240 276 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PLPP2O43688 288 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PRAMEF4O60810 478 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 RCBTB2O95199 551 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 C1orf105O95561 183 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 SLC16A8O95907 504 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 IL5P05113 134 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 KLK1P06870 262 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 GIMD1P0DJR0 217 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PRR23D2P0DMB1 279 aaPredicted RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 NPPBP16860 134 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 TNFRSF1BP20333 461 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 TEAD1P28347 426 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 CALCRP30988 508 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PRKAR1BP31321 381 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 NUP62P37198 522 aaPredicted RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 AVPR1BP47901 424 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ZNF81P51508 661 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ACTA2P62736 377 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ACTG2P63267 376 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 EIF2B5Q13144 721 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 SNTB2Q13425 540 aaKnown RBP9.64□□□□□ -0.87
CHFR-219ENST00000541341 FCN2Q15485 313 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ZSWIM7Q19AV6 140 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 ZNF385BQ569K4 471 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 AADACL4Q5VUY2 407 aa9.64□□□□□ -0.87
CHFR-219ENST00000541341 PRAMEF9Q5VWM5 478 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms