RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CGAP01215 116 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 OPN1LWP04000 364 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 CD8BP10966 210 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 UQCRBP14927 111 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 FKBP2P26885 142 aaKnown RBP11.73□□□□□ -0.53
LTBR-208ENST00000541005 ADSLP30566 484 aaPredicted RBP11.73□□□□□ -0.53
LTBR-208ENST00000541005 UQCRC1P31930 480 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 APOBEC1P41238 236 aaKnown RBP11.73□□□□□ -0.53
LTBR-208ENST00000541005 HTR3AP46098 478 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 CARD18P57730 90 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 RAC3P60763 192 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 MERTKQ12866 999 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 EPS8Q12929 822 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 LARS2Q15031 903 aaKnown RBP11.73□□□□□ -0.53
LTBR-208ENST00000541005 TMEM176BQ3YBM2 270 aaPredicted RBP11.73□□□□□ -0.53
LTBR-208ENST00000541005 RUNDC3AQ59EK9 446 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 FAM214BQ7L5A3 538 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 VRK2Q86Y07 508 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 KIF18BQ86Y91 864 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 ZNF563Q8TA94 476 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 C10orf82Q8WW14 230 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 OSTF1Q92882 214 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 CGREF1Q99674 301 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 SPATA9Q9BWV2 254 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 SRXN1Q9BYN0 137 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 GP6Q9HCN6 339 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 SERINC1Q9NRX5 453 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 IFT52Q9Y366 437 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 CHST2Q9Y4C5 530 aa11.73□□□□□ -0.53
LTBR-208ENST00000541005 SPIN1Q9Y657 262 aaPredicted RBP11.73□□□□□ -0.53
LTBR-208ENST00000541005 FBP2O00757 339 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 AP3D1O14617 1153 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 PGM3O95394 542 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 PABPC4LP0CB38 370 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 SLC7A1P30825 629 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 RYKP34925 604 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 ACAA2P42765 397 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 IDH2P48735 452 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 CLK1P49759 484 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 MAP2K6P52564 334 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 CDK6Q00534 326 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 RNPS1Q15287 305 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 ADRM1Q16186 407 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 TRMT5Q32P41 509 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 SYT14P1Q58G82 188 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 REEP3Q6NUK4 255 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 NET1Q7Z628 596 aaPredicted RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 BTLAQ7Z6A9 289 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 RBM24Q9BX46 236 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 ARMC7Q9H6L4 198 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 CACYBPQ9HB71 228 aaKnown RBP11.72□□□□□ -0.53
LTBR-208ENST00000541005 MCCC2Q9HCC0 563 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 CTPS2Q9NRF8 586 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 RLIMQ9NVW2 624 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 ZNF232Q9UNY5 417 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 EMC9Q9Y3B6 208 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 PDZD2O15018 2839 aa11.72□□□□□ -0.53
LTBR-208ENST00000541005 BBIP1A8MTZ0 92 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 C5orf58C9J3I9 102 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 ZNF208O43345 1280 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 DNPH1O43598 174 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 PRKAR1BP31321 381 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 SLC1A3P43003 542 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 KIR2DL3P43628 341 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 CPA2P48052 419 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 POLR2HP52434 150 aaKnown RBP11.71□□□□□ -0.53
LTBR-208ENST00000541005 TLE4Q04727 773 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 KLF10Q13118 480 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 NFYCQ13952 458 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 MAPRE2Q15555 327 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 GTF2IRD2BQ6EKJ0 949 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 DHRS4L2Q6PKH6 230 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 ZNF550Q7Z398 422 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 LUZP2Q86TE4 346 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 GTF2IRD2Q86UP8 949 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 SLC43A2Q8N370 569 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 CLIP4Q8N3C7 705 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 ATP6V1C2Q8NEY4 427 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 NFKBIDQ8NI38 313 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 FAM222BQ8WU58 562 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 ZNF559Q9BR84 538 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 ADAM19Q9H013 955 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 KLHL13Q9P2N7 655 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
LTBR-208ENST00000541005 TACC2O95359 2948 aa11.71□□□□□ -0.54
LTBR-208ENST00000541005 HRNRQ86YZ3 2850 aaPredicted RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 ROS1P08922 2347 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 A0A1W2PNR3 127 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 FXYD1O00168 92 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 PMS2P2O95744 297 aa11.7□□□□□ -0.54
LTBR-208ENST00000541005 PLGP00747 810 aaPredicted RBP11.7□□□□□ -0.54
LTBR-208ENST00000541005 NPPAP01160 153 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms