RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 KANSL1Q7Z3B3 1105 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 SRFBP1Q8NEF9 429 aaKnown RBP13.05□□□□□ -0.32
INO80E-203ENST00000540562 ABHD4Q8TB40 342 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 FAM174AQ8TBP5 190 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 ING3Q9NXR8 418 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 MED31Q9Y3C7 131 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 IER3IP1Q9Y5U9 82 aa13.05□□□□□ -0.32
INO80E-203ENST00000540562 DUXAA6NLW8 204 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 GPANK1O95872 356 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 HIST1H1CP16403 213 aaKnown RBP13.04□□□□□ -0.32
INO80E-203ENST00000540562 TRA2BP62995 288 aaKnown RBP13.04□□□□□ -0.32
INO80E-203ENST00000540562 FAAH2Q6GMR7 532 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 HSD17B8Q92506 261 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 RASD2Q96D21 266 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SPACA7Q96KW9 195 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 ACOXLQ9NUZ1 547 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 FLRT3Q9NZU0 649 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SLC17A4Q9Y2C5 497 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SLCO1B1Q9Y6L6 691 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 A0A1B0GWA3 101 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 K7EQS6 105 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 FGF9P31371 208 aaPredicted RBP13.04□□□□□ -0.32
INO80E-203ENST00000540562 PLAURQ03405 335 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 UXS1Q8NBZ7 420 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 DNAAF1Q8NEP3 725 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 OR5M3Q8NGP4 307 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 HERVK_113Q902F9 699 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 GAL3ST3Q96A11 431 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 MED28Q9H204 178 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 FAM60AQ9NP50 221 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 ACTR10Q9NZ32 417 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 CALML5Q9NZT1 146 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 ITGB1BP2Q9UKP3 347 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 UNC13CQ8NB66 2214 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 SYT5O00445 386 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 BHLHE40O14503 412 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 RGS13O14921 159 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 FZD7O75084 574 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 EGFP01133 1207 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 HMGN1P05114 100 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 NDUFS1P28331 727 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 RRAS2P62070 204 aaPredicted RBP13.04□□□□□ -0.32
INO80E-203ENST00000540562 ERVK-25P63136 954 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 EEF1A1P68104 462 aaKnown RBP13.04□□□□□ -0.32
INO80E-203ENST00000540562 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 LINC00471Q8N535 108 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 KISS1RQ969F8 398 aaPredicted RBP13.04□□□□□ -0.32
INO80E-203ENST00000540562 GTF2A1LQ9UNN4 478 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 C2orf16Q68DN1 1984 aa13.04□□□□□ -0.32
INO80E-203ENST00000540562 MCIDASD6RGH6 385 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 ATF1P18846 271 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 POU3F3P20264 500 aaPredicted RBP13.03□□□□□ -0.32
INO80E-203ENST00000540562 FOXL2P58012 376 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 BTG2P78543 158 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 ZNF267Q14586 743 aaPredicted RBP13.03□□□□□ -0.32
INO80E-203ENST00000540562 FCRL6Q6DN72 434 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 SIAH3Q8IW03 269 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 SIX5Q8N196 739 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 ZNF619Q8N2I2 560 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 ZNF511Q8NB15 262 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 AVL9Q8NBF6 648 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 TIMM29Q9BSF4 260 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 SEMA4CQ9C0C4 833 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 TSPAN10Q9H1Z9 355 aaPredicted RBP13.03□□□□□ -0.32
INO80E-203ENST00000540562 NT5DC2Q9H857 520 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 NCKAP1Q9Y2A7 1128 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 CDC14CA4D256 554 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 ZNF780AO75290 641 aaPredicted RBP13.03□□□□□ -0.32
INO80E-203ENST00000540562 TFP02787 698 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 MT-ND5P03915 603 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 SBK2P0C263 348 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 RPS5P46782 204 aaKnown RBP13.03□□□□□ -0.32
INO80E-203ENST00000540562 ZNF85Q03923 595 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 YIF1BQ5BJH7 314 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
INO80E-203ENST00000540562 OR8H3Q8N146 312 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 KCNN2Q9H2S1 579 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 KIR3DX1Q9H7L2 352 aa13.03□□□□□ -0.32
INO80E-203ENST00000540562 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 EPOPA6NHQ4 379 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 SSNA1O43805 119 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 GATBO75879 557 aaKnown RBP13.02□□□□□ -0.32
INO80E-203ENST00000540562 ANKRD34CP0C6C1 535 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 OC90Q02509 493 aaPredicted RBP13.02□□□□□ -0.32
INO80E-203ENST00000540562 RPL6Q02878 288 aaKnown RBP13.02□□□□□ -0.32
INO80E-203ENST00000540562 CD200R1LQ6Q8B3 271 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 PRR22Q8IZ63 422 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 TOMM5Q8N4H5 51 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 IL17RCQ8NAC3 791 aa13.02□□□□□ -0.32
INO80E-203ENST00000540562 AKAP1Q92667 903 aaKnown RBP eCLIP13.02□□□□□ -0.32
INO80E-203ENST00000540562 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms