RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	INHBB	P09529	407 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	UBTFL6	P0CB48	400 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	RPS4Y1	P22090	263 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SLC7A1	P30825	629 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	DIO1	P49895	249 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	KHK	P50053	298 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CASP9	P55211	416 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	KCNJ10	P78508	379 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CHRNE	Q04844	493 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ITGAD	Q13349	1161 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SYT14P1	Q58G82	188 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475		Q5PR19	223 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475		Q6ZT83	130 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MTDH	Q86UE4	582 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CMIP	Q8IY22	773 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TMCO5A	Q8N6Q1	288 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	RFWD2	Q8NHY2	731 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	S100PBP	Q96BU1	408 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PLPPR2	Q96GM1	343 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CCL19	Q99731	98 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SLC35A5	Q9BS91	424 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	QRSL1	Q9H0R6	528 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SLC38A1	Q9H2H9	487 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CENPH	Q9H3R5	247 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SERINC1	Q9NRX5	453 aa		11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-223	ENST00000540475	UQCRHL	A0A096LP55	91 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	IGHV3-15	A0A0B4J1V0	119 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TMEM120B	A0PK00	339 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	AGAP5	A6NIR3	686 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TRPC5OS	A6NMA1	111 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	DIAPH2	O60879	1101 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ADAM11	O75078	769 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PGM3	O95394	542 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PMS2P2	O95744	297 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PLAU	P00749	431 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ADA	P00813	363 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	COX5A	P20674	150 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CCR4	P51679	360 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MAP2K6	P52564	334 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CSNK2A1	P68400	391 aa	Predicted RBP	11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	H3F3A	P84243	136 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	RASGEF1B	Q0VAM2	473 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TAB1	Q15750	504 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MAPK11	Q15759	364 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	NCMAP	Q5T1S8	102 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	HHAT	Q5VTY9	493 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ABLIM2	Q6H8Q1	611 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	LRRC74B	Q6ZQY2	392 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SSX8	Q7RTT4	187 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GRINA	Q7Z429	371 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	RNF130	Q86XS8	419 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ADGRG3	Q86Y34	549 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	P3H2	Q8IVL5	708 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TRIML2	Q8N7C3	387 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ATP6V1C2	Q8NEY4	427 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TLCD1	Q96CP7	247 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	COX4I2	Q96KJ9	171 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	OR5B2	Q96R09	309 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PANX1	Q96RD7	426 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CHRNA9	Q9UGM1	479 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	TRAPPC4	Q9Y296	219 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	HDGFL3	Q9Y3E1	203 aa		11.62	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GOLGA8Q	A0A0J9YX86	632 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GOLGA8O	A6NCC3	632 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZNF716	A6NP11	495 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	GOLGA8N	F8WBI6	632 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	HS3ST1	O14792	307 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	IL6	P05231	212 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ZCCHC18	P0CG32	403 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	EDNRA	P25101	427 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	EPHA3	P29320	983 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CHI3L1	P36222	383 aa	Predicted RBP	11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CDKN2C	P42773	168 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	HTR3A	P46098	478 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PTH2R	P49190	550 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MVD	P53602	400 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SLC16A1	P53985	500 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	MERTK	Q12866	999 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SYPL1	Q16563	259 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PDCD4	Q53EL6	469 aa	Known RBP	11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	WFDC8	Q8IUA0	241 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	ANKFN1	Q8N957	763 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	PIWIL2	Q8TC59	973 aa	Known RBP	11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	KISS1R	Q969F8	398 aa	Predicted RBP	11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	OR52E6	Q96RD3	313 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	INPP5K	Q9BT40	448 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	NGB	Q9NPG2	151 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CTPS2	Q9NRF8	586 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	SPIN1	Q9Y657	262 aa	Predicted RBP	11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	USF3	Q68DE3	2245 aa		11.61	□□□□□ -0.55
SEMA4D-223	ENST00000540475	CLDN24	A6NM45	220 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	FAM171A2	A8MVW0	826 aa		11.6	□□□□□ -0.55
SEMA4D-223	ENST00000540475	OVOL3	O00110	214 aa		11.6	□□□□□ -0.55

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