RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 LRRTM2O43300 516 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 S1PR1P21453 382 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TRAM1Q15629 374 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CDNFQ49AH0 187 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 FAM76BQ5HYJ3 339 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 ENTPD8Q5MY95 495 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 GPAT4Q86UL3 456 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TSTD1Q8NFU3 115 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SLC7A13Q8TCU3 470 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 POTEKPQ9BYX7 375 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 WASH6PQ9NQA3 447 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 RBFOX1Q9NWB1 397 aaKnown RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 MMP17Q9ULZ9 603 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 ICKQ9UPZ9 632 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 DCDC2BA2VCK2 349 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SCO2O43819 266 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 LCMT2O60294 686 aaKnown RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TNFP01375 233 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 ACP2P11117 423 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CTXN1P60606 82 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 AIMP2Q13155 320 aaKnown RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PCGF3Q3KNV8 242 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PLCZ1Q86YW0 608 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 OR2A1Q8NGT9 310 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM163Q8TC26 289 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 BPIFA2Q96DR5 249 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PEX11GQ96HA9 241 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TXNDC15Q96J42 360 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SAV1Q9H4B6 383 aaPredicted RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PRTFDC1Q9NRG1 225 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM184CQ9NVA4 438 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SPHK1Q9NYA1 384 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 KLHL9Q9P2J3 617 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 OSGIN1Q9UJX0 560 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CA14Q9ULX7 337 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PADI2Q9Y2J8 665 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 GPX5O75715 221 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SFTPBP07988 381 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 GABRG2P18507 467 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SLC1A3P43003 542 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 KIAA1024LP59773 190 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 FXNQ16595 210 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CTF1Q16619 201 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF750Q32MQ0 723 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 GLT8D1Q68CQ7 371 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 C1orf94Q6P1W5 598 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 ARHGAP11AQ6P4F7 1023 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PDZD9Q8IXQ8 264 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TMEFF1Q8IYR6 380 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 TOE1Q96GM8 510 aaKnown RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SNX18Q96RF0 628 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 GON7Q9BXV9 100 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 NEUROG3Q9Y4Z2 214 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 KIF26AQ9ULI4 1882 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 TVP23AA6NH52 213 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 NPIPA5E9PKD4 350 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 CLEC3AO75596 197 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 APBB3O95704 486 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 LDOC1O95751 146 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 AMY2AP04746 511 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ARSBP15848 533 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 CFL1P23528 166 aaKnown RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 GDI2P50395 445 aaKnown RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 BLKP51451 505 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 TFF2Q03403 129 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ILKQ13418 452 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 RPL13AP3Q6NVV1 102 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF584Q8IVC4 421 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 RIT1Q92963 219 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 TPSD1Q9BZJ3 242 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 METTL17Q9H7H0 456 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 POLE3Q9NRF9 147 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 NPIPA1Q9UND3 350 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 PLCL2Q9UPR0 1127 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 RCE1Q9Y256 329 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 PIP5K1CO60331 668 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 SLC22A5O76082 557 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 GP1BBP13224 206 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ELAVL4P26378 380 aaKnown RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 UGT2B10P36537 528 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 MLLT3P42568 568 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 PRKXP51817 358 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ACTA2P62736 377 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ACTG2P63267 376 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 RASGEF1BQ0VAM2 473 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 FAM198BQ6UWH4 519 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 Q6ZS52 159 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM17Q86X19 198 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 UBQLNLQ8IYU4 475 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 CSNK1A1LQ8N752 337 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 RLN3Q8WXF3 142 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ARSGQ96EG1 525 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 PINK1Q9BXM7 581 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 PITHD1Q9GZP4 211 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF700Q9H0M5 742 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 SYT4Q9H2B2 425 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ANKRD34BA5PLL1 514 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms