RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SGCBQ16585 318 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
USB1-203ENST00000539737 LRIF1Q5T3J3 769 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 LSRQ86X29 649 aaPredicted RBP13.34□□□□□ -0.27
USB1-203ENST00000539737 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 PNPT1Q8TCS8 783 aaKnown RBP13.34□□□□□ -0.27
USB1-203ENST00000539737 XAGE5Q8WWM1 108 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 C1GALT1C1Q96EU7 318 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 PRRG4Q9BZD6 226 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 PAIP1Q9H074 479 aaKnown RBP13.34□□□□□ -0.27
USB1-203ENST00000539737 RNF122Q9H9V4 155 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 SLC6A13Q9NSD5 602 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 A0A087WZY1 265 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 OR2M5A3KFT3 312 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 NPIPB9F8W1W9 429 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 TNFRSF21O75509 655 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 SOD3P08294 240 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 FCGR2AP12318 317 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 ZNF41P51814 821 aaPredicted RBP13.33□□□□□ -0.28
USB1-203ENST00000539737 FUT5Q11128 374 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 FADDQ13158 208 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 GUSBP1Q15486 140 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 MAPRE2Q15555 327 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 CLEC12BQ2HXU8 276 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 GTDC1Q4AE62 458 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 APOOLQ6UXV4 268 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 ZNF614Q8N883 585 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 LILRB1Q8NHL6 650 aaPredicted RBP13.33□□□□□ -0.28
USB1-203ENST00000539737 C10orf82Q8WW14 230 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.28
USB1-203ENST00000539737 RAB8BQ92930 207 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 ROPN1LQ96C74 230 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.28
USB1-203ENST00000539737 SLC39A3Q9BRY0 314 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 SLC52A3Q9NQ40 469 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 YAE1D1Q9NRH1 226 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 ZNF701Q9NV72 531 aaPredicted RBP13.33□□□□□ -0.28
USB1-203ENST00000539737 P2RX2Q9UBL9 471 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 NDUFAF1Q9Y375 327 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 WDR45Q9Y484 360 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 AP4B1Q9Y6B7 739 aa13.33□□□□□ -0.28
USB1-203ENST00000539737 NPIPA5A0A0B4J1W7 369 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 TMEM247A6NEH6 219 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 NPIPA7E9PJI5 369 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 SLC22A2O15244 555 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 NPIPA8P0DM63 369 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 HOXB9P17482 250 aaPredicted RBP13.32□□□□□ -0.28
USB1-203ENST00000539737 ME2P23368 584 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 LSP1P33241 339 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 ACVR1BP36896 505 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 CRATP43155 626 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 MVDP53602 400 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
USB1-203ENST00000539737 DSTNP60981 165 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 SF3A3Q12874 501 aaKnown RBP eCLIP13.32□□□□□ -0.28
USB1-203ENST00000539737 GPR68Q15743 365 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 GPAT3Q53EU6 434 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 KLHL26Q53HC5 615 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 COX20Q5RI15 118 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.32□□□□□ -0.28
USB1-203ENST00000539737 PDSS1Q5T2R2 415 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 SPATA21Q7Z572 469 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 GATSQ8NAP1 163 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 PHOSPHO1Q8TCT1 267 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 AURKBQ96GD4 344 aaPredicted RBP13.32□□□□□ -0.28
USB1-203ENST00000539737 FANCFQ9NPI8 374 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 PAQR5Q9NXK6 330 aaPredicted RBP13.32□□□□□ -0.28
USB1-203ENST00000539737 ELOVL5Q9NYP7 299 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 CALML5Q9NZT1 146 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 ZNF175Q9Y473 711 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 FREM1Q5H8C1 2179 aa13.32□□□□□ -0.28
USB1-203ENST00000539737 CLIC1O00299 241 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 HS3ST1O14792 307 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 GPRIN2O60269 458 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 H6PDO95479 791 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 PLGP00747 810 aaPredicted RBP13.31□□□□□ -0.28
USB1-203ENST00000539737 NR2F1P10589 423 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 CD8BP10966 210 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 GNGT1P63211 74 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 FAPQ12884 760 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 GNA13Q14344 377 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 CD226Q15762 336 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 ZNF141Q15928 474 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 BEX5Q5H9J7 111 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 PAGE3Q5JUK9 113 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 PDZK1Q5T2W1 519 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 AP1ARQ63HQ0 302 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 TYW3Q6IPR3 259 aaKnown RBP13.31□□□□□ -0.28
USB1-203ENST00000539737 FRRS1Q6ZNA5 592 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 LRRC74BQ6ZQY2 392 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 DHDDSQ86SQ9 333 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 GGNQ86UU5 652 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 DPP10Q8N608 796 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 B4GALNT2Q8NHY0 566 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 PMM1Q92871 262 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 ACTR6Q9GZN1 396 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms