RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 MINDY2Q8NBR6 621 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 OR5L2Q8NGL0 311 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 OR6Q1Q8NGQ2 317 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 OR4C3Q8NH37 302 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 OR8K3Q8NH51 312 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 PFN4Q8NHR9 129 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 NUBPLQ8TB37 319 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 PHOSPHO1Q8TCT1 267 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 LIPHQ8WWY8 451 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 TSLPQ969D9 159 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CLIP3Q96DZ5 547 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 SH3YL1Q96HL8 342 aaPredicted RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 OR5M11Q96RB7 305 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 OR6C1Q96RD1 312 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GAL3ST4Q96RP7 486 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GPX7Q96SL4 187 aaPredicted RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 VN1R1Q9GZP7 353 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 SLIRPQ9GZT3 109 aaKnown RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 WWTR1Q9GZV5 400 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 NXF5Q9H1B4 397 aaKnown RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 C20orf141Q9NUB4 165 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 FLRT3Q9NZU0 649 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 AKAP7Q9P0M2 348 aaPredicted RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 TNFRSF10DQ9UBN6 386 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 PPIEQ9UNP9 301 aaKnown RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 GSTK1Q9Y2Q3 226 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CAB39Q9Y376 341 aaPredicted RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 PCDHGB7Q9Y5F8 929 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 IGHV5-10-1A0A0J9YXX1 117 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 OR6C70A6NIJ9 312 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 METTL15A6NJ78 407 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ALG1L2C9J202 215 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 TAF4O00268 1085 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 KPNA4O00629 521 aaPredicted RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 IMPA2O14732 288 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ARPC3O15145 178 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 TSPAN2O60636 221 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 CPNE3O75131 537 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 REM1O75628 298 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 OR7A10O76100 309 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 GP1BAP07359 652 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ZGLP1P0C6A0 271 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ZNF883P0CG24 379 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 FGF5P12034 268 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 NR4A1P22736 598 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 CD40LGP29965 261 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 SLC1A3P43003 542 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 HTR3AP46098 478 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 TMED10P49755 219 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 SUMO3P55854 103 aaPredicted RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 SLC26A5P58743 744 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 LSM3P62310 102 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPARC-209ENST00000539687 ZNF45Q02386 682 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 PLAURQ03405 335 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 RUNX1T1Q06455 604 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 SKP2Q13309 424 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 CBFBQ13951 182 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 NNATQ16517 81 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 SLC35D3Q5M8T2 416 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 C1orf189Q5VU69 101 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 OVCH1Q7RTY7 1134 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ATCAYQ86WG3 371 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 EGFL6Q8IUX8 553 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ACBD7Q8N6N7 88 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 TMCO5AQ8N6Q1 288 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 POMGNT2Q8NAT1 580 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 OR13C2Q8NGS9 318 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ZNF563Q8TA94 476 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 IFI44Q8TCB0 444 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 STT3BQ8TCJ2 826 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 HAVCR2Q8TDQ0 301 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 AP3S1Q92572 193 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 C3orf49Q96BT1 292 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 EFHD2Q96C19 240 aaPredicted RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 CCDC74BQ96LY2 380 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 GFM1Q96RP9 751 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 CHCHD6Q9BRQ6 235 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 ARHGAP9Q9BRR9 750 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 NUDT9Q9BW91 350 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 TBL1XR1Q9BZK7 514 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 SEMA4CQ9C0C4 833 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 NXF2Q9GZY0 626 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 SLC26A1Q9H2B4 701 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 MEPEQ9NQ76 525 aaPredicted RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 HINT3Q9NQE9 182 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 GPR52Q9Y2T5 361 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 PCDHGB2Q9Y5G2 931 aa9.33□□□□□ -0.92
SPARC-209ENST00000539687 TNRC6BQ9UPQ9 1833 aaKnown RBP9.33□□□□□ -0.92
SPARC-209ENST00000539687 SPAG17Q6Q759 2223 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 A0A075B6Q4 140 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 LY6G6EA0A0G2JKS1 128 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 A0A1W2PQM1 296 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 VSTM2BA6NLU5 285 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 A8MUA0 341 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 ZNF670-ZNF695F2Z2N8 137 aa9.32□□□□□ -0.92
SPARC-209ENST00000539687 NDUFB5O43674 189 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms