RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 A0A1W2PRQ8 180 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 HMX3A6NHT5 357 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 WWP2O00308 870 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 OR10H3O60404 316 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 IGFBP1P08833 259 aaPredicted RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 HBQ1P09105 142 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC37A1P57057 533 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 TAB1Q15750 504 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 MRPL2Q5T653 305 aaKnown RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 PODNL1Q6PEZ8 512 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 LSRQ86X29 649 aaPredicted RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 CADM2Q8N3J6 435 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 GRPEL2Q8TAA5 225 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 STT3BQ8TCJ2 826 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 RPRD1BQ9NQG5 326 aaKnown RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 SEMA4GQ9NTN9 838 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 NUP210LQ5VU65 1888 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 ERVH48-1M5A8F1 160 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 TFECO14948 347 aaPredicted RBP15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 SOX30O94993 753 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 NTN1O95631 604 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 CCNYL3P0C7X3 344 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF883P0CG24 379 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 TRAPPC2P0DI81 140 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 TRAPPC2BP0DI82 140 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 NID1P14543 1247 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 RPS5P46782 204 aaKnown RBP15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 SMIM11AP58511 58 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 TAS2R41P59536 307 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ILKQ13418 452 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 NKAIN1Q4KMZ8 207 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAAH2Q6GMR7 532 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 LANCL3Q6ZV70 420 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 PPP1R3BQ86XI6 285 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZSCAN1Q8NBB4 408 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC2A12Q8TD20 617 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 MCHR1Q99705 422 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 POLR2J2Q9GZM3 115 aaKnown RBP15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 MMP28Q9H239 520 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 Q9N2J8 555 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 SSR3Q9UNL2 185 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 EFCAB7A8K855 629 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAM25AB3EWG3 89 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAM25CB3EWG5 89 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAM25GB3EWG6 89 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAAHO00519 579 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 DDAH2O95865 285 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 GKN3PP0CG01 181 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 PRG2P13727 222 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF91Q05481 1191 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZFP36L1Q07352 338 aaKnown RBP15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 SCN1BQ07699 218 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ELAVL1Q15717 326 aaKnown RBP15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 Q5BKY6 102 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ENTPD8Q5MY95 495 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 LYPD8Q6UX82 237 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 NANOGP1Q8N7R0 232 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 ARSGQ96EG1 525 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 LMF1Q96S06 567 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC22A4Q9H015 551 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 PRODH2Q9UF12 536 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 RPL36Q9Y3U8 105 aaKnown RBP15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 OR10H1Q9Y4A9 318 aa15.72■□□□□ 0.11
PCDHB17P-201ENST00000539533 LOC105371267A0A1B0GV96 52 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZGLP1P0C6A0 271 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF136P52737 540 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 PLAURQ03405 335 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 GLYR1Q49A26 553 aaPredicted RBP15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 PDZK1Q5T2W1 519 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 C12orf73Q69YU5 71 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF614Q8N883 585 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 PROKR2Q8NFJ6 384 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF721Q8TF20 911 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 DIO2Q92813 273 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 MESP1Q9BRJ9 268 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 POLE3Q9NRF9 147 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 CBLCQ9ULV8 474 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 CDHR4A6H8M9 788 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZSCAN5BA6NJL1 495 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 H3BN98 237 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 THY1P04216 161 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 IGKV3-11P04433 115 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 YES1P07947 543 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 IFNA8P32881 189 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 MXD1Q05195 221 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 MLLT11Q13015 90 aaPredicted RBP15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 ASAH1Q13510 395 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 SF3A2Q15428 464 aaKnown RBP15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 EIPR1Q53HC9 387 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 YIF1BQ5BJH7 314 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 LIPKQ5VXJ0 399 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 LCN10Q6JVE6 187 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 PGBD2Q6P3X8 592 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 PAQR6Q6TCH4 344 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 FAM131AQ6UXB0 335 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 CASP12Q6UXS9 341 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 NOXA1Q86UR1 476 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 PHC2Q8IXK0 858 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 BCORP1Q8N888 145 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 OR9Q1Q8NGQ5 310 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms