RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FAM74A7A6NL05 159 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 FXYD6P3P58550 94 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 FAM74A3Q4VXF1 159 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 UBE3DQ7Z6J8 389 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 AMER3Q8N944 861 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 USB1Q9BQ65 265 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF334Q9HCZ1 680 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 KLK11Q9UBX7 282 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 TAC3Q9UHF0 121 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 PLAGL1Q9UM63 463 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 FXYD6-FXYD2A0A087WZ82 144 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 OR5K4A6NMS3 321 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 NDUFB6O95139 128 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 BMP7P18075 431 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 ACADLP28330 430 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 NUDT18Q6ZVK8 323 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 HMGB4Q8WW32 186 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 RAD51AP1Q96B01 352 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 MOAP1Q96BY2 351 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 OR7D2Q96RA2 312 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 FXYD6Q9H0Q3 95 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 DNTTIP1Q9H147 329 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 OR51V1Q9H2C8 321 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 CMC2Q9NRP2 79 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 CPNE7Q9UBL6 633 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 PURGQ9UJV8 347 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 FEZF1A0PJY2 475 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 NEDD8-MDP1E9PL57 170 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 LEFTY1O75610 366 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 MAPK3P27361 379 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 TEAD1P28347 426 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 ACTC1P68032 377 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 ACTA1P68133 377 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 MAT1AQ00266 395 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 FGL1Q08830 312 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 IL10RAQ13651 578 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 PAQR7Q86WK9 346 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 SMPDL3BQ92485 455 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 DERL3Q96Q80 235 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 ZDHHC5Q9C0B5 715 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC25A32Q9H2D1 315 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 NRIP3Q9NQ35 241 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC7A7Q9UM01 511 aa17.21■□□□□ 0.35
SFSWAP-207ENST00000538548 A0A0A6YYD5 115 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 MAN2B1O00754 1011 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 SULT1B1O43704 296 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 KCNJ13O60928 360 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 SIX6O95475 246 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 CKMP06732 381 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 DEFA5Q01523 94 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 DPPA4Q7L190 304 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 CXorf40AQ8TE69 158 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 SMIM19Q96E16 107 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 CD180Q99467 661 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 DPH1Q9BZG8 443 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 OR2AG1Q9H205 316 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 DPEP2Q9H4A9 486 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 SIDT1Q9NXL6 827 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 ASF1AQ9Y294 204 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 KCNK7Q9Y2U2 307 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 A0A0G2JN53 185 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 A0A1B0GTQ1 180 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 UBE2QL1A1L167 161 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 ELFN1P0C7U0 828 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 PTNP21246 168 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 GDI2P50395 445 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 S100A12P80511 92 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 MRPS10P82664 201 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 REEP5Q00765 189 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 OR4C11Q6IEV9 310 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 PXT1Q8NFP0 134 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 OR6K3Q8NGY3 331 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC25A38Q96DW6 304 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 HS6ST2Q96MM7 605 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 OR1F2PQ96R84 312 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 MRPL17Q9NRX2 175 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 TAS2R10Q9NYW0 307 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC6A5Q9Y345 797 aa17.2■□□□□ 0.34
SFSWAP-207ENST00000538548 OGG1O15527 345 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 PQBP1O60828 265 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 ERAL1O75616 437 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 PCDH8O95206 1070 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 H2BFSP57053 126 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 GMFBP60983 142 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 PRR5P85299 388 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 FOXK2Q01167 660 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 HDDC3Q8N4P3 179 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 ORAI1Q96D31 301 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 DEFB118Q96PH6 123 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 GINS4Q9BRT9 223 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 NKX6-2Q9C056 277 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 ENKD1Q9H0I2 346 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 IL21Q9HBE4 155 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 TSPAN11A1L157 253 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 GLOD5A6NK44 160 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms