RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 STEAP1Q9UHE8 339 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 TAGLN2P37802 199 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 SPINT3P49223 89 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 POU3F4P49335 361 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 TNK1Q13470 666 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 PTPRCAPQ14761 206 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 P2RY14Q15391 338 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 LRRC26Q2I0M4 334 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 C1orf220Q5T0J3 134 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 OR4K15Q8NH41 348 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 RNF170Q96K19 258 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 CASD1Q96PB1 797 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 HERPUD2Q9BSE4 406 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ATP13A2Q9NQ11 1180 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ZNF629Q9UEG4 869 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 EXO1Q9UQ84 846 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 NPFFR2Q9Y5X5 522 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 TIAM2Q8IVF5 1701 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 A0A0D9SEW6 157 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 LEFTY2O00292 366 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 NUDT21O43809 227 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 IRF2P14316 349 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 FUT1P19526 365 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ZP3P21754 424 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 SLC1A3P43003 542 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 MEF2AQ02078 507 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 ZNF252P-AS1Q0IIN9 211 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 SLC14A1Q13336 389 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ELOCQ15369 112 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 GLYR1Q49A26 553 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 TMEM164Q5U3C3 297 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ZNF322Q6U7Q0 402 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 SMIM15Q7Z3B0 74 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 KLHDC8AQ8IYD2 350 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 CSNK1A1LQ8N752 337 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 OR2A12Q8NGT7 310 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 BPIFA2Q96DR5 249 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 LRFN5Q96NI6 719 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 DCLRE1CQ96SD1 692 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 DPH7Q9BTV6 452 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 KATNB1Q9BVA0 655 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 OR52D1Q9H346 318 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 SCPEP1Q9HB40 452 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 A4GALTQ9NPC4 353 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 NENFQ9UMX5 172 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 TMEM98Q9Y2Y6 226 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 PRELID3BQ9Y3B1 194 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 A0A087WZY1 265 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 HTR6P50406 440 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 PDE7AQ13946 482 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 KIAA0141Q14154 515 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 ALKBH2Q6NS38 261 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 OR1E3Q8WZA6 343 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ZMYND19Q96E35 227 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 ARNT2Q9HBZ2 717 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 GKN1Q9NS71 199 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 SERTAD4Q9NUC0 356 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 IER3IP1Q9Y5U9 82 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 PUS1Q9Y606 427 aaKnown RBP eCLIP6.49□□□□□ -1.37
SORT1-209ENST00000538502 CSNK1G3Q9Y6M4 447 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 COL2A1P02458 1487 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 FAM155AB1AL88 458 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 MAGEB4O15481 346 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 C21orf33P30042 268 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 PRDX3P30048 256 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 FASLGP48023 281 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 CSNK1DP48730 415 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 FXYD4P59646 89 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 ERVFC1P60507 584 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 RPS25P62851 125 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 RPS26P62854 115 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 SLC7A9P82251 487 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 MMABQ96EY8 250 aaPredicted RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 CMSS1Q9BQ75 279 aaKnown RBP6.49□□□□□ -1.37
SORT1-209ENST00000538502 MED18Q9BUE0 208 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 OR8D2Q9GZM6 311 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 CNIH4Q9P003 139 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 OSGIN1Q9UJX0 560 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 GMEB2Q9UKD1 530 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 PCDHAC2Q9Y5I4 1007 aa6.49□□□□□ -1.37
SORT1-209ENST00000538502 A0A0B4J2A0 478 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 A0A1W2PRU2 124 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 M0R3H8 397 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 GPR32O75388 356 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ZNF280AP59817 542 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 H3F3AP84243 136 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ACSM1Q08AH1 577 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PDZK1IP1Q13113 114 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 KDM4DQ6B0I6 523 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 C1orf94Q6P1W5 598 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FCRLAQ7L513 359 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ABHD12BQ7Z5M8 362 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 DPPA2Q7Z7J5 298 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CLEC14AQ86T13 490 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SIAH3Q8IW03 269 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ZNF75AQ96N20 296 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ACPTQ9BZG2 426 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms