RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 HAO2Q9NYQ3 351 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 H2AFY2Q9P0M6 372 aaPredicted RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 IL20RAQ9UHF4 553 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 SERTAD3Q9UJW9 196 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 ICAM5Q9UMF0 924 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 CYP8B1Q9UNU6 501 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 SLC35A3Q9Y2D2 325 aa8.52□□□□□ -1.05
DDB1-211ENST00000538280 COL5A1P20908 1838 aaPredicted RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 ASCC3Q8N3C0 2202 aaKnown RBP8.52□□□□□ -1.05
DDB1-211ENST00000538280 SMG1Q96Q15 3661 aaKnown RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 A0A1W2PQL4 384 aaPredicted RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 A0A1W2PR77 199 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 SHISA3A0PJX4 238 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 LNP1A1A4G5 178 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 SLC22A31A6NKX4 558 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 FAM183AA6NL82 134 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 C12orf71A8MTZ7 269 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 GTPBP1O00178 669 aaKnown RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 RGS5O15539 181 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ZNF749O43361 778 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 RNF13O43567 381 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ADAM11O75078 769 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CLPSP04118 112 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CTSEP14091 401 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 BCKDHBP21953 392 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 GPR3P46089 330 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CAPZA2P47755 286 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CAPZBP47756 277 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 NOVA1P51513 510 aaKnown RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 SKP1P63208 163 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 MXD1Q05195 221 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 FUT7Q11130 342 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 C1orf61Q13536 156 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 FAM53BQ14153 422 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 GALEQ14376 348 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.51□□□□□ -1.05
DDB1-211ENST00000538280 DEFB110Q30KQ9 67 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ZNF542PQ5EBM4 170 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 PDZK1Q5T2W1 519 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 DDI2Q5TDH0 399 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 AGAP6Q5VW22 663 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 PLBD1Q6P4A8 553 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 SYT13Q7L8C5 426 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ZNF550Q7Z398 422 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ZNF761Q86XN6 746 aaPredicted RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 MARCH9Q86YJ5 346 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 UBQLNLQ8IYU4 475 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CDK20Q8IZL9 346 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ACBD7Q8N6N7 88 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ZFP41Q8N8Y5 198 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 SLC37A3Q8NCC5 494 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 OR6C4Q8NGE1 309 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 OR13C2Q8NGS9 318 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 PTP4A1Q93096 173 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 TMEM203Q969S6 136 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 KLHDC7BQ96G42 594 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 AHCYL2Q96HN2 611 aaKnown RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 ZNF578Q96N58 590 aaPredicted RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 AGAP4Q96P64 663 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 CCNL2Q96S94 520 aaPredicted RBP8.51□□□□□ -1.05
DDB1-211ENST00000538280 ATF6BQ99941 703 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ALG8Q9BVK2 526 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 GPR174Q9BXC1 333 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 RNF32Q9H0A6 362 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 MIR1-1HGQ9H1L0 117 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 MCCC2Q9HCC0 563 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 STARD5Q9NSY2 213 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 C14orf119Q9NWQ9 140 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 BABAM2Q9NXR7 383 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 SLCO1B1Q9Y6L6 691 aa8.51□□□□□ -1.05
DDB1-211ENST00000538280 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 PCDH15Q96QU1 1955 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 A0A0A6YYC8 382 aaPredicted RBP8.5□□□□□ -1.05
DDB1-211ENST00000538280 IGHV1OR15-9A0A0B4J2B8 117 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 A0A1W2PQ09 198 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 FITM1A5D6W6 292 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 SLC9B1P1A6NJY1 282 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 C4orf47A7E2U8 309 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 PRR23D1E9PI22 279 aaPredicted RBP8.5□□□□□ -1.05
DDB1-211ENST00000538280 I3L1I5 382 aaPredicted RBP8.5□□□□□ -1.05
DDB1-211ENST00000538280 DYRK3O43781 588 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 OR10H2O60403 315 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 PRAMEF2O60811 474 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 SC5DO75845 299 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
DDB1-211ENST00000538280 IGF2P01344 180 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 CSF2P04141 144 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 WNT1P04628 370 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 NGFRP08138 427 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 CSF3P09919 207 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 SBK2P0C263 348 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 TRAPPC2P0DI81 140 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 TRAPPC2BP0DI82 140 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 PRR23D2P0DMB1 279 aaPredicted RBP8.5□□□□□ -1.05
DDB1-211ENST00000538280 NME1P15531 152 aaKnown RBP8.5□□□□□ -1.05
DDB1-211ENST00000538280 TYRP1P17643 537 aa8.5□□□□□ -1.05
DDB1-211ENST00000538280 CELP19835 753 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms