RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TRIM36Q9NQ86 728 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 CARD8Q9Y2G2 431 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 ZNF337Q9Y3M9 751 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 PCDHGB7Q9Y5F8 929 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 RANBP2P49792 3224 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 C2orf92A0A1B0GVN3 265 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 TCRBV16S1A1N1A0A5B0 115 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 HRKO00198 91 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 RGS13O14921 159 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 TO15178 435 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 CLPSP04118 112 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 IGKV3-11P04433 115 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 NGFRP08138 427 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 UBL4AP11441 157 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 BCKDHBP21953 392 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 CDC20Q12834 499 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 SOWAHCQ53LP3 525 aaPredicted RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 OR2G6Q5TZ20 316 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 HLA-DQA1Q5Y7H0 255 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 ZC3H14Q6PJT7 736 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 ZNF322Q6U7Q0 402 aaPredicted RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 DPY19L2P2Q6ZN68 376 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 CADM2Q8N3J6 435 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 PARP16Q8N5Y8 322 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 SLC37A3Q8NCC5 494 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 RNF167Q9H6Y7 350 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 PNO1Q9NRX1 252 aaKnown RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 COPS7AQ9UBW8 275 aa12.48□□□□□ -0.41
SMG6-203ENST00000536871 TMEM184BQ9Y519 407 aaPredicted RBP12.48□□□□□ -0.41
SMG6-203ENST00000536871 A0A1W2PQD3 144 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 ARPC3O15145 178 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 NTN1O95631 604 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 PTTG1O95997 202 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 ANKRD34CP0C6C1 535 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 ACY1Q03154 408 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 GALEQ14376 348 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 CRTC2Q53ET0 693 aaPredicted RBP12.47□□□□□ -0.41
SMG6-203ENST00000536871 FNDC7Q5VTL7 733 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 KIRREL2Q6UWL6 708 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 GATAD2AQ86YP4 633 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 SHISA5Q8N114 240 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 PLPP5Q8NEB5 264 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 OR4F15Q8NGB8 312 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 OR51G2Q8NGK0 314 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 OR4C3Q8NH37 302 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 OR1L3Q8NH93 324 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 TM9SF4Q92544 642 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 TEAD3Q99594 435 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 BABAM2Q9NXR7 383 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 SLC6A5Q9Y345 797 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 NOX1Q9Y5S8 564 aa12.47□□□□□ -0.41
SMG6-203ENST00000536871 A0A1B0GVT2 93 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 DAPL1A0PJW8 107 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 CENPBD1B2RD01 187 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 SOCS6O14544 535 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 PLD2O14939 933 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 ZNF264O43296 627 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 MT-ND5P03915 603 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 APEHP13798 732 aaKnown RBP12.46□□□□□ -0.41
SMG6-203ENST00000536871 FOSL2P15408 326 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 TGM1P22735 817 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 F8A1P23610 371 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 SEPHS1P49903 392 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 ZP2Q05996 745 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 IL10RAQ13651 578 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 SLC35D3Q5M8T2 416 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 LYSMD4Q5XG99 296 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 TMEM71Q6P5X7 295 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 SLC29A4Q7RTT9 530 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 LHFPL3Q86UP9 236 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 METTL27Q8N6F8 245 aaPredicted RBP12.46□□□□□ -0.41
SMG6-203ENST00000536871 OR51A7Q8NH64 312 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 SETD6Q8TBK2 473 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 GPX7Q96SL4 187 aaPredicted RBP12.46□□□□□ -0.41
SMG6-203ENST00000536871 ZNF649Q9BS31 505 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 MCCC2Q9HCC0 563 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 PCDHGB6Q9Y5F9 930 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 MAU2Q9Y6X3 613 aa12.46□□□□□ -0.41
SMG6-203ENST00000536871 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.42
SMG6-203ENST00000536871 C12orf71A8MTZ7 269 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.42
SMG6-203ENST00000536871 IMPA2O14732 288 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 OR7A10O76100 309 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 CDRT1O95170 752 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 SLC2A10O95528 541 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 APOA1P02647 267 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 GRK6P43250 576 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 RPS7P62081 194 aaKnown RBP12.46□□□□□ -0.42
SMG6-203ENST00000536871 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms