RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 KIAA0513O60268 411 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NUDT7P0C024 238 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 UBL4AP11441 157 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ELK4P28324 431 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ADH6P28332 368 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SHC1P29353 583 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC6A8P48029 635 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PSME3P61289 254 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MAPK14Q16539 360 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SYPL1Q16563 259 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C8orf82Q6P1X6 216 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C16orf89Q6UX73 402 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FRRS1Q6ZNA5 592 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SERPINA11Q86U17 422 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 LILRA2Q8N149 483 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OR10A6Q8NH74 314 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FBXO27Q8NI29 283 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NRGNQ92686 78 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ARSGQ96EG1 525 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SPATA9Q9BWV2 254 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SAP130Q9H0E3 1048 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 A4GALTQ9NPC4 353 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 POLE3Q9NRF9 147 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CALML5Q9NZT1 146 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 WDR45Q9Y484 360 aa16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GPC6Q9Y625 555 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-209ENST00000536717 A6NNC1 897 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C5orf58C9J3I9 102 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CXCL13O43927 109 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 EIF4E2O60573 245 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SMNDC1O75940 238 aaKnown RBP eCLIP16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NTN1O95631 604 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CGAP01215 116 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 BCHEP06276 602 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 GUSBP08236 651 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TFPTP0C1Z6 253 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 T-ENOLP0DO92 83 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 EPXP11678 715 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FCGR2AP12318 317 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PRKCAP17252 672 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CRISP3P54108 245 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SIRPAP78324 504 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SKP2Q13309 424 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 DAZAP2Q15038 168 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PGAM4Q8N0Y7 254 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C10orf111Q8N326 155 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ANKFN1Q8N957 763 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OR5W2Q8NH69 310 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OR2V1Q8NHB1 315 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC38A5Q8WUX1 472 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MAL2Q969L2 176 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZG16BQ96DA0 208 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 KLHL15Q96M94 604 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TMEM38AQ9H6F2 299 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SPAG4Q9NPE6 437 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 RASSF1Q9NS23 344 aa16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PAQR5Q9NXK6 330 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 DNAJB12Q9NXW2 375 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ETV2O00321 342 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 DNAJA2O60884 412 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 H6PDO95479 791 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ARAFP10398 606 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NID1P14543 1247 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ME2P23368 584 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SFTPDP35247 375 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC7A2P52569 658 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC25A3Q00325 362 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FGFBP1Q14512 234 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC25A53Q5H9E4 307 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PPP4R4Q6NUP7 873 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF474Q6S9Z5 364 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 LRRC74BQ6ZQY2 392 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 SLC15A3Q8IY34 581 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ZNF619Q8N2I2 560 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TMCO5AQ8N6Q1 288 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C11orf65Q8NCR3 313 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 MRGPRX4Q96LA9 322 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 LAT2Q9GZY6 243 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OPN3Q9H1Y3 402 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 ITGB1BP2Q9UKP3 347 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 BCAS1O75363 584 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CSTAP01040 98 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CPOXP36551 454 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CCR4P51679 360 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CDK6Q00534 326 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FAM27E3Q08E93 113 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 RBBP4Q09028 425 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CBFBQ13951 182 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 QPRTQ15274 297 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 HBMQ6B0K9 141 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 C6orf89Q6UWU4 347 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FAM214BQ7L5A3 538 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 NET1Q7Z628 596 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 FAM71CQ8NEG0 241 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TOR1AIP2Q8NFQ8 470 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 OIT3Q8WWZ8 545 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 TMEM19Q96HH6 336 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 POLDIP3Q9BY77 421 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 PRRG4Q9BZD6 226 aa15.99■□□□□ 0.15
TNFRSF1A-209ENST00000536717 CLEC4MQ9H2X3 399 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms