RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZNF571Q7Z3V5 609 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-207ENST00000536634 CAMKMTQ7Z624 323 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 CRLF3Q8IUI8 442 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 EID3Q8N140 333 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 TTC29Q8NA56 475 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-207ENST00000536634 MLKLQ8NB16 471 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF485Q8NCK3 441 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 KBTBD8Q8NFY9 601 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 NEK11Q8NG66 645 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 OR5M8Q8NGP6 311 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 FGFBP3Q8TAT2 258 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF670Q9BS34 389 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 FNDC11Q9BVV2 318 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 TRABDQ9H4I3 376 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 ASB8Q9H765 288 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 RRAGDQ9NQL2 400 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-207ENST00000536634 OR6C2Q9NZP2 312 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 A0A1W2PPR1 153 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 KRT87PA6NCN2 255 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ATP6V0E1O15342 81 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF500O60304 480 aaPredicted RBP4.61□□□□□ -1.67
CLIP1-207ENST00000536634 OR10H2O60403 315 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 CDC40O60508 579 aaKnown RBP eCLIP4.61□□□□□ -1.67
CLIP1-207ENST00000536634 AVILO75366 819 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 HEXBP07686 556 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ATP1B2P14415 290 aaPredicted RBP4.61□□□□□ -1.67
CLIP1-207ENST00000536634 FERP16591 822 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 CXCR2P25025 360 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PTPN3P26045 913 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PSMB5P28074 263 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PKLRP30613 574 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 KCNJ10P78508 379 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PCLAFQ15004 111 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 SLC1A5Q15758 541 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 CMPK2Q5EBM0 449 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 TCTE1Q5JU00 501 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ADAMTSL4-AS1Q5T5F5 129 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 TMEM211Q6ICI0 200 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PRMT9Q6P2P2 845 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 CLYBLQ8N0X4 340 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 CLDN19Q8N6F1 224 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 NIPA2Q8N8Q9 360 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 AMER3Q8N944 861 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 TMEM178AQ8NBL3 297 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 OR4K2Q8NGD2 314 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 OR13J1Q8NGT2 312 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 OR5K2Q8NHB8 316 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 GOT1L1Q8NHS2 421 aaPredicted RBP4.61□□□□□ -1.67
CLIP1-207ENST00000536634 RAPGEF5Q92565 580 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 GIMAP5Q96F15 307 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 DCUN1D1Q96GG9 259 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 OLFM3Q96PB7 478 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 OLFM1Q99784 485 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 UTP23Q9BRU9 249 aaKnown RBP4.61□□□□□ -1.67
CLIP1-207ENST00000536634 LAT2Q9GZY6 243 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 THAP2Q9H0W7 228 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 WDR13Q9H1Z4 485 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 HAUS4Q9H6D7 363 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 YY1AP1Q9H869 796 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PLEKHF2Q9H8W4 249 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 INTS9Q9NV88 658 aaKnown RBP4.61□□□□□ -1.67
CLIP1-207ENST00000536634 TRPC4Q9UBN4 977 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 TEKT2Q9UIF3 430 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 CRLS1Q9UJA2 301 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ANAPC7Q9UJX3 599 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ASF1AQ9Y294 204 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 HEY1Q9Y5J3 304 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 PRSS21Q9Y6M0 314 aa4.61□□□□□ -1.67
CLIP1-207ENST00000536634 ARHGAP21Q5T5U3 1957 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 SCN3AQ9NY46 2000 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 USF3Q68DE3 2245 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 IGLV3-16A0A075B6K0 115 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 A0A0J9YVX5 310 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 FEZF1A0PJY2 475 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 TRIM64A6NGJ6 449 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 TRIM64BA6NI03 449 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 GABRR3A8MPY1 467 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 RASGRF2O14827 1237 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 TFECO14948 347 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 STX7O15400 261 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 NME2P1O60361 137 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 BCL10O95999 233 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 C8orf89P0DMQ9 161 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 RALBP11234 206 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 ICAM2P13598 275 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PORP16435 677 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 ALOX12P18054 663 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 EFNA1P20827 205 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 SLC26A3P40879 764 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 SSR1P43307 286 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 CLK1P49759 484 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF140P52738 457 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 NAP1L1P55209 391 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 TPD52P55327 224 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 MAT1AQ00266 395 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 OC90Q02509 493 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 WASHC5Q12768 1159 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 RPA4Q13156 261 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms