RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR2M5A3KFT3 312 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 E9PQ18 207 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CLIC1O00299 241 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SYT5O00445 386 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 PHYHO14832 338 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 PSMD3O43242 534 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 IFNA2P01563 188 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C1SP09871 688 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 VSIG10L2P0DP72 767 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MDKP21741 143 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 CRABP1P29762 137 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CEACAM8P31997 349 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 GALNSP34059 522 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RPL3P39023 403 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 TFPI2P48307 235 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 EPHB3P54753 998 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MRPS10P82664 201 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 HGFACQ04756 655 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MAP4K2Q12851 820 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GAB1Q13480 694 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 NFATC4Q14934 902 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 BATFQ16520 125 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CSRP2Q16527 193 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C4orf17Q53FE4 359 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TMEM35AQ53FP2 167 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CCDC157Q569K6 752 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GPRC6AQ5T6X5 926 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 STPG1Q5TH74 334 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 LIN54Q6MZP7 749 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TMEM220Q6QAJ8 160 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 PDZD4Q76G19 769 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 LINGO2Q7L985 606 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C6orf120Q7Z4R8 191 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TSPAN33Q86UF1 283 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RBM45Q8IUH3 476 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 CILP2Q8IUL8 1156 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RNF149Q8NC42 400 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 DENND6BQ8NEG7 585 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 OR2G2Q8NGZ5 317 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 EEF1AKMT1Q8WVE0 214 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RAB3CQ96E17 227 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RNFT2Q96EX2 444 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 KLHL5Q96PQ7 755 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CDCA3Q99618 268 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 ELOVL1Q9BW60 279 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 DERL2Q9GZP9 239 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 METTL9Q9H1A3 318 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GAREM1Q9H706 876 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ISG20L2Q9H9L3 353 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 NMNAT1Q9HAN9 279 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 SLC25A19Q9HC21 320 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ACKR4Q9NPB9 350 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 WSB2Q9NYS7 404 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 CACNG4Q9UBN1 327 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MMP24Q9Y5R2 645 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 NPTNQ9Y639 398 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SIRT4Q9Y6E7 314 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 FAM220BPB1ANY3 271 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 H3BSH0 61 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RFXANKO14593 260 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ATXN7O15265 892 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 MAGEB4O15481 346 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 SNAI1O95863 264 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 LGI1O95970 557 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 OTCP00480 354 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SEMG1P04279 462 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RLN1P04808 185 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SOD3P08294 240 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 NR2F6P10588 404 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 AGAP20933 346 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 NTSP30990 170 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 DCTDP32321 178 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GDNFP39905 211 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MAGEB1P43366 347 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 OMPP47874 163 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CRISP1P54107 249 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CLDN12P56749 244 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 MLLT11Q13015 90 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 C1DQ13901 141 aaKnown RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 VMACQ2NL98 169 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 PLK5Q496M5 336 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 ELFN2Q5R3F8 820 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C1orf185Q5T7R7 199 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 GDF6Q6KF10 455 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 FAM111BQ6SJ93 734 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 RPTNQ6XPR3 784 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 TAF8Q7Z7C8 310 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CAMKVQ8NCB2 501 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 HUS1BQ8NHY5 278 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 C9orf43Q8TAL5 461 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 LINC01599Q8WXQ3 324 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 AKR1E2Q96JD6 320 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 DIRC2Q96SL1 478 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SEPT5Q99719 369 aaPredicted RBP3.45□□□□□ -1.86
MCF2-210ENST00000536274 G6PC3Q9BUM1 346 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 NFKBIZQ9BYH8 718 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CHST5Q9GZS9 411 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 SRMSQ9H3Y6 488 aa3.45□□□□□ -1.86
MCF2-210ENST00000536274 CCDC86Q9H6F5 360 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms