RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 TMPRSS3P57727 454 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 COPZ1P61923 177 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 PLCXD2Q0VAA5 305 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 TIMM50Q3ZCQ8 353 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 GPAT3Q53EU6 434 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CRB2Q5IJ48 1285 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ACER2Q5QJU3 275 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OR2T5Q6IEZ7 315 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FIGNL1Q6PIW4 674 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OPN5Q6U736 354 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CCBE1Q6UXH8 406 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 SNX29P2Q8IUI4 249 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 DND1Q8IYX4 353 aaKnown RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 SIRT6Q8N6T7 355 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 IL17RDQ8NFM7 739 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OR2T29Q8NH02 315 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 BBS10Q8TAM1 723 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OIT3Q8WWZ8 545 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 DIO2Q92813 273 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OMA1Q96E52 524 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 DHRS1Q96LJ7 313 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 LMF1Q96S06 567 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 TREX2Q9BQ50 279 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 SLA2Q9H6Q3 261 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 POLE4Q9NR33 117 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 RPS6KA6Q9UK32 745 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OR6C70A6NIJ9 312 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 NPIPB9F8W1W9 429 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FCMRO60667 390 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 GCM2O75603 506 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 REM1O75628 298 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 PPM1BO75688 479 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ALX3O95076 343 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ZIC2O95409 532 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FADS2O95864 444 aaKnown RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ITPKBP27987 946 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FMO3P31513 532 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 SOX6P35712 828 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 KRT20P35900 424 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CLK3P49761 638 aaKnown RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ZNF791Q3KP31 576 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 COLEC12Q5KU26 742 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 SPANXN2Q5MJ10 180 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CCNJQ5T5M9 372 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 B3GNTL1Q67FW5 361 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FCRLBQ6BAA4 426 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 TYW3Q6IPR3 259 aaKnown RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 FRRS1Q6ZNA5 592 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 NUP54Q7Z3B4 507 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 SLC46A3Q7Z3Q1 461 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 TMEM179BQ7Z7N9 219 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ZDHHC21Q8IVQ6 265 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 GPALPP1Q8IXQ4 340 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 UBQLNLQ8IYU4 475 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 OR6F1Q8NGZ6 308 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 ANGPTL6Q8NI99 470 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 C9orf43Q8TAL5 461 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CRELD1Q96HD1 420 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 RIBC2Q9H4K1 309 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 DIABLOQ9NR28 239 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
SCARB1-204ENST00000535005 WDR45Q9Y484 360 aa11.28□□□□□ -0.6
SCARB1-204ENST00000535005 DOCK10Q96BY6 2186 aa11.27□□□□□ -0.6
SCARB1-204ENST00000535005 A0A075B6Q4 140 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 KIAA0513O60268 411 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 NGFRP08138 427 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 KDELR2P33947 212 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 NR4A2P43354 598 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 RPS5P46782 204 aaKnown RBP11.27□□□□□ -0.61
SCARB1-204ENST00000535005 SSR4P51571 173 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
SCARB1-204ENST00000535005 EFR3AQ14156 821 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 CDK10Q15131 360 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 ABHD17BQ5VST6 288 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 FAHD1Q6P587 224 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
SCARB1-204ENST00000535005 ZAR1Q86SH2 424 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 PRR22Q8IZ63 422 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 HS3ST5Q8IZT8 346 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 ZNF619Q8N2I2 560 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 PARP16Q8N5Y8 322 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 APOBEC4Q8WW27 367 aaKnown RBP11.27□□□□□ -0.61
SCARB1-204ENST00000535005 TTC9Q92623 222 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 MED30Q96HR3 178 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 COL21A1Q96P44 957 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 GABARAPL3Q9BY60 117 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 TRIM45Q9H8W5 580 aaPredicted RBP11.27□□□□□ -0.61
SCARB1-204ENST00000535005 MARCH7Q9H992 704 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 IL1RAPQ9NPH3 570 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 PCDHGB6Q9Y5F9 930 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 LYVE1Q9Y5Y7 322 aa11.27□□□□□ -0.61
SCARB1-204ENST00000535005 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms