RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 AP2M1Q96CW1 435 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 HPDLQ96IR7 371 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 DNAJC1Q96KC8 554 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 C4orf45Q96LM5 186 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 MUS81Q96NY9 551 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SERPINB12Q96P63 405 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PRMT1Q99873 361 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 VGLL1Q99990 258 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 DDX50Q9BQ39 737 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 MRPS26Q9BYN8 205 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 POLR1EQ9GZS1 481 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 ATG10Q9H0Y0 220 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SMYD3Q9H7B4 428 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 LRRC40Q9H9A6 602 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 NHEJ1Q9H9Q4 299 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 LMAN1LQ9HAT1 526 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 FGFR1OP2Q9NVK5 253 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SOHLH2Q9NX45 425 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 IL37Q9NZH6 218 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PAK5Q9P286 719 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 C19orf25Q9UFG5 118 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 ATP6V1HQ9UI12 483 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PTBP2Q9UKA9 531 aaKnown RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 ANGPTL2Q9UKU9 493 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PLA2G4CQ9UP65 541 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 SATB2Q9UPW6 733 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PPP1R3CQ9UQK1 317 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 CFL2Q9Y281 166 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 STK38LQ9Y2H1 464 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 COQ4Q9Y3A0 265 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 KLF2Q9Y5W3 355 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 EP300Q09472 2414 aaPredicted RBP2.92□□□□□ -1.94
USP48-215ENST00000534705 PCM1Q15154 2024 aa2.92□□□□□ -1.94
USP48-215ENST00000534705 PIKFYVEQ9Y2I7 2098 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PTPRZ1P23471 2315 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 COL27A1Q8IZC6 1860 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 A0A087WZY1 265 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 A0A1W2PNU3 283 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 FAM92AA1XBS5 289 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 TCP11X1B4DZS4 312 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 F8WDY8 70 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CLDN5O00501 218 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PRRG1O14668 218 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 POLR1CO15160 346 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 NUDT21O43809 227 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 SELENOFO60613 162 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CCDC22O60826 627 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 EDF1O60869 148 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 HUS1O60921 280 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CRLF1O75462 422 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ECI2O75521 394 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SPAG6O75602 509 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 DCTN3O75935 186 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 GAS8O95995 478 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 KRT6AP02538 564 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PCCBP05166 539 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ZDHHC11BP0C7U3 371 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 UBTFL6P0CB48 400 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 ZCCHC18P0CG32 403 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SPP1P10451 314 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SAGP10523 405 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 THRAP10827 490 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SLC2A2P11168 524 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 IRF2P14316 349 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ANPEPP15144 967 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 AOC1P19801 751 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CYP2A7P20853 494 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 UGT1A4P22310 534 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 JAK1P23458 1154 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CFL1P23528 166 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 ACP1P24666 158 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 GABRR2P28476 465 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 HLA-FP30511 346 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PKLRP30613 574 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 FOXN2P32314 431 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PHBP35232 272 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SLC1A1P43005 524 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 IER3P46695 156 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ATP5OP48047 213 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 NPBWR1P48145 328 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 GCLMP48507 274 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PGFP49763 221 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 VAMP7P51809 220 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 MAPK12P53778 367 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 NUP107P57740 925 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 LMO4P61968 165 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 NOP14P78316 857 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 MYL7Q01449 175 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 GBE1Q04446 702 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 LRRC63Q05C16 580 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 FCHO2Q0JRZ9 810 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SMARCB1Q12824 385 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 OVGP1Q12889 678 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 IL24Q13007 206 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PDZK1IP1Q13113 114 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SELENBP1Q13228 472 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PLD1Q13393 1074 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 RAPSNQ13702 412 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SQLEQ14534 574 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 EFTUD2Q15029 972 aaKnown RBP eCLIP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms