RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 GRNP28799 593 aaKnown RBP12.59□□□□□ -0.39
VPS11-205ENST00000534551 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 EIF1P41567 113 aaKnown RBP12.59□□□□□ -0.39
VPS11-205ENST00000534551 GSK3BP49841 420 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 RAC1P63000 192 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 LIPEQ05469 1076 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 FOXF2Q12947 444 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 PON3Q15166 354 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 BCL2A1Q16548 175 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 DUSP7Q16829 419 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 LRRC23Q53EV4 343 aaPredicted RBP12.59□□□□□ -0.39
VPS11-205ENST00000534551 C3orf33Q6P1S2 294 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 DHRS4L2Q6PKH6 230 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 HACD2Q6Y1H2 254 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 ZNF808Q8N4W9 903 aaPredicted RBP12.59□□□□□ -0.39
VPS11-205ENST00000534551 RELL2Q8NC24 303 aaPredicted RBP12.59□□□□□ -0.39
VPS11-205ENST00000534551 OR2T12Q8NG77 320 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 OR2V1Q8NHB1 315 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 VANGL1Q8TAA9 524 aaPredicted RBP12.59□□□□□ -0.39
VPS11-205ENST00000534551 BCAS4Q8TDM0 211 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 SH3GL1Q99961 368 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 UCK2Q9BZX2 261 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 ABCD2Q9UBJ2 740 aa12.59□□□□□ -0.39
VPS11-205ENST00000534551 TMED7-TICAM2A0A0A6YYA0 188 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 IGHV3-15A0A0B4J1V0 119 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ZC3H12DA2A288 527 aaKnown RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 MBD3L4A6NDZ8 208 aaPredicted RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 MBD3L3A6NE82 208 aaPredicted RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 MBD3L5A6NJ08 208 aaPredicted RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 SLC22A20A6NK97 555 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 C19orf84I3L1E1 186 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 NCK1P16333 377 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ME2P23368 584 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ADH6P28332 368 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 TACR3P29371 465 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 PTGER4P35408 488 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 DLX5P56178 289 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 BNIP2Q12982 314 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 NPTX1Q15818 432 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 TMEM176BQ3YBM2 270 aaPredicted RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 HBMQ6B0K9 141 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 TMEM211Q6ICI0 200 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 MTFR2Q6P444 385 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ARPINQ7Z6K5 226 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 TSPYL5Q86VY4 417 aaPredicted RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 RBM45Q8IUH3 476 aaKnown RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 EID3Q8N140 333 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 FAM156AQ8NDB6 213 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 MBD3L2Q8NHZ7 208 aaPredicted RBP12.58□□□□□ -0.4
VPS11-205ENST00000534551 TMEM234Q8WY98 164 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 PMM1Q92871 262 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ARL5BQ96KC2 179 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ZNF607Q96SK3 696 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ARHGDIGQ99819 225 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 OSGIN1Q9UJX0 560 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 HECTD1Q9ULT8 2610 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 CLEC4AQ9UMR7 237 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 ZNF232Q9UNY5 417 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 TMED7Q9Y3B3 224 aa12.58□□□□□ -0.4
VPS11-205ENST00000534551 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 LINC01387J3KSC0 135 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 TPST2O60704 377 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 SERPINB7O75635 380 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 CEACAM8P31997 349 aaPredicted RBP12.57□□□□□ -0.4
VPS11-205ENST00000534551 SMSP52788 366 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 RGS8P57771 180 aaPredicted RBP12.57□□□□□ -0.4
VPS11-205ENST00000534551 SGCBQ16585 318 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 SYT14P1Q58G82 188 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ERICH5Q6P6B1 374 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ESPNLQ6ZVH7 1005 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 P4HA3Q7Z4N8 544 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ADGRG3Q86Y34 549 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 RBM15BQ8NDT2 890 aaKnown RBP12.57□□□□□ -0.4
VPS11-205ENST00000534551 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 INTS12Q96CB8 462 aaKnown RBP12.57□□□□□ -0.4
VPS11-205ENST00000534551 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 SPATA5L1Q9BVQ7 753 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ALG2Q9H553 416 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 CHRNA9Q9UGM1 479 aa12.57□□□□□ -0.4
VPS11-205ENST00000534551 ASH1LQ9NR48 2969 aaKnown RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 A0A1B0GWA3 101 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 ELOVL7A1L3X0 281 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 PRORSD1PA6NEY8 169 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 FAAHO00519 579 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 ADAMDEC1O15204 470 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
VPS11-205ENST00000534551 TFPIP10646 304 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 BMP5P22003 454 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 SLC7A1P30825 629 aa12.56□□□□□ -0.4
VPS11-205ENST00000534551 CHRNB4P30926 498 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms