RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 GDF7Q7Z4P5 450 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 NET1Q7Z628 596 aaPredicted RBP19.11■□□□□ 0.65
PKP3-211ENST00000534401 BTLAQ7Z6A9 289 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 ADGRG3Q86Y34 549 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 CLIP4Q8N3C7 705 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 SLC25A43Q8WUT9 341 aaPredicted RBP19.11■□□□□ 0.65
PKP3-211ENST00000534401 SRXN1Q9BYN0 137 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 GLRX2Q9NS18 164 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 RLIMQ9NVW2 624 aa19.11■□□□□ 0.65
PKP3-211ENST00000534401 MCTS1Q9ULC4 181 aaKnown RBP19.11■□□□□ 0.65
PKP3-211ENST00000534401 PDZD2O15018 2839 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 SS18L1O75177 396 aaPredicted RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 PABPC4LP0CB38 370 aaKnown RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 CD8BP10966 210 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 SSTR2P30874 369 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 RYKP34925 604 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 CLK1P49759 484 aaKnown RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 CDK6Q00534 326 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 SORDQ00796 357 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 MERTKQ12866 999 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 LARS2Q15031 903 aaKnown RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 ZNF239Q16600 458 aaKnown RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 REEP3Q6NUK4 255 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 VWA1Q6PCB0 445 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 FAM214BQ7L5A3 538 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 PTOV1Q86YD1 416 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 RNF128Q8TEB7 428 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 CPNE4Q96A23 557 aaPredicted RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 LRRC46Q96FV0 321 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 GMPPAQ96IJ6 420 aaPredicted RBP19.1■□□□□ 0.65
PKP3-211ENST00000534401 GP6Q9HCN6 339 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 CTPS2Q9NRF8 586 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 ZNF232Q9UNY5 417 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 FREM1Q5H8C1 2179 aa19.1■□□□□ 0.65
PKP3-211ENST00000534401 CFAP73A6NFT4 308 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 SYNGR4O95473 234 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 NPPAP01160 153 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 SLC1A3P43003 542 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 HTR3AP46098 478 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 IDH2P48735 452 aaKnown RBP19.09■□□□□ 0.65
PKP3-211ENST00000534401 GZMMP51124 257 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 MAP2K6P52564 334 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 RBBP4Q09028 425 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 KAT8Q9H7Z6 458 aaKnown RBP19.09■□□□□ 0.65
PKP3-211ENST00000534401 TIGARQ9NQ88 270 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 PLSCR4Q9NRQ2 329 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 SERINC1Q9NRX5 453 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.09■□□□□ 0.65
PKP3-211ENST00000534401 CHRNA9Q9UGM1 479 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 OSGIN1Q9UJX0 560 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 ABCA4P78363 2273 aa19.09■□□□□ 0.65
PKP3-211ENST00000534401 SPG11Q96JI7 2443 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 FAM221AA4D161 298 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 FXYD1O00168 92 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 PCBP3P57721 371 aaKnown RBP19.08■□□□□ 0.64
PKP3-211ENST00000534401 SELPLGQ14242 412 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 SYT14P1Q58G82 188 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 DHRS4L2Q6PKH6 230 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 TMPPEQ6ZT21 453 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 KIF18BQ86Y91 864 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 NFKBIDQ8NI38 313 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 ZNF563Q8TA94 476 aa19.08■□□□□ 0.64
PKP3-211ENST00000534401 A0A1W2PNR3 127 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 BBIP1A8MTZ0 92 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 EEF1E1-BLOC1S5C9J1V9 151 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 EEF1E1O43324 174 aaKnown RBP19.07■□□□□ 0.64
PKP3-211ENST00000534401 ZNF208O43345 1280 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 PRKAR1BP31321 381 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 NFYCQ13952 458 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 TRMT5Q32P41 509 aaKnown RBP19.07■□□□□ 0.64
PKP3-211ENST00000534401 ZNF311Q5JNZ3 666 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 GTF2IRD2BQ6EKJ0 949 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 ZNF474Q6S9Z5 364 aaPredicted RBP19.07■□□□□ 0.64
PKP3-211ENST00000534401 ZNF550Q7Z398 422 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 GTF2IRD2Q86UP8 949 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 OR6K3Q8NGY3 331 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 RBM24Q9BX46 236 aaKnown RBP19.07■□□□□ 0.64
PKP3-211ENST00000534401 ING1Q9UK53 422 aaPredicted RBP19.07■□□□□ 0.64
PKP3-211ENST00000534401 HDGFL3Q9Y3E1 203 aa19.07■□□□□ 0.64
PKP3-211ENST00000534401 C5orf58C9J3I9 102 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 GCM2O75603 506 aaPredicted RBP19.06■□□□□ 0.64
PKP3-211ENST00000534401 GKN3PP0CG01 181 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 PRG2P13727 222 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 UQCRC1P31930 480 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 POLR2HP52434 150 aaKnown RBP19.06■□□□□ 0.64
PKP3-211ENST00000534401 SF3A3Q12874 501 aaKnown RBP eCLIP19.06■□□□□ 0.64
PKP3-211ENST00000534401 SCARB2Q14108 478 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 RNPS1Q15287 305 aaKnown RBP19.06■□□□□ 0.64
PKP3-211ENST00000534401 MAPRE2Q15555 327 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 NANOGP8Q6NSW7 305 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 SLC43A2Q8N370 569 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 HIPK4Q8NE63 616 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 ROBO4Q8WZ75 1007 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 PRRG4Q9BZD6 226 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 ARMC7Q9H6L4 198 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 NANOGQ9H9S0 305 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 MCCC2Q9HCC0 563 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 GALNT8Q9NY28 637 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 TRAPPC4Q9Y296 219 aa19.06■□□□□ 0.64
PKP3-211ENST00000534401 SPIN1Q9Y657 262 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms