RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SLC35A3Q9Y2D2 325 aa7.91□□□□□ -1.14
COPB1-211ENST00000534234 PRAMEF27A3QJZ7 478 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 CCDC154A6NI56 674 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 FAM171A2A8MVW0 826 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 HMGN4O00479 90 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 SDHDO14521 159 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 HS3ST1O14792 307 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ZNF500O60304 480 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 CYTIPO60759 359 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 BCAS1O75363 584 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 LY6G6DO95868 133 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 C1QCP02747 245 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ALDOCP09972 364 aaKnown RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 TFPIP10646 304 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 OR3A2P47893 321 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 PTH2RP49190 550 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 KHKP50053 298 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 CSNK2A1P68400 391 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 CHRNEQ04844 493 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 FUT5Q11128 374 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 CAPRIN1Q14444 709 aaKnown RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 SYT14P1Q58G82 188 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 NCMAPQ5T1S8 102 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ZNF621Q6ZSS3 439 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 Q6ZT83 130 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 BHLHA15Q7RTS1 189 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 SPATA19Q7Z5L4 167 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 GALNT5Q7Z7M9 940 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 HMGN2P46Q86SG4 172 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 MTDHQ86UE4 582 aaKnown RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 RNF130Q86XS8 419 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ZNF100Q8IYN0 542 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 TRIML2Q8N7C3 387 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 FAM71CQ8NEG0 241 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 RAB3IL1Q8TBN0 382 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 SLC25A43Q8WUT9 341 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 IGFBPL1Q8WX77 278 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ZNF75CPQ92670 426 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 COX4I2Q96KJ9 171 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 OR52E6Q96RD3 313 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 PANX1Q96RD7 426 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ZNF300Q96RE9 604 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 CCDC106Q9BWC9 280 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 CXorf56Q9H5V9 222 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ESRP2Q9H6T0 727 aaKnown RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 WDR55Q9H6Y2 383 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 CTPS2Q9NRF8 586 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.9□□□□□ -1.14
COPB1-211ENST00000534234 PRSS50Q9UI38 385 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 LAMP3Q9UQV4 416 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 RNF115Q9Y4L5 304 aa7.9□□□□□ -1.14
COPB1-211ENST00000534234 NIPBLQ6KC79 2804 aaeCLIP7.9□□□□□ -1.143e-11■■■■□ 20
COPB1-211ENST00000534234 PCNX3Q9H6A9 2034 aa7.9□□□□□ -1.15
COPB1-211ENST00000534234 GOLGA8QA0A0J9YX86 632 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 GOLGA8OA6NCC3 632 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 TRIM64A6NGJ6 449 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 TRIM64BA6NI03 449 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 CLDN24A6NM45 220 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 ZNF724A8MTY0 619 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 GOLGA8NF8WBI6 632 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 SMAD7O15105 426 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 HDAC3O15379 428 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 CLOCKO15516 846 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 LYZL6O75951 148 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 GSNP06396 782 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 PGRP06401 933 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 HEXAP06865 529 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 FESP07332 822 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 CD3EP07766 207 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 PAX1P15863 534 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 EDNRAP25101 427 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 FKBP2P26885 142 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 EPHA3P29320 983 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 IL12AP29459 219 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 IDH2P48735 452 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 HPCAP84074 193 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 SYPL1Q16563 259 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 ADAM5Q6NVV9 412 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 GRINAQ7Z429 371 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 ADGRG3Q86Y34 549 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 ARFGAP2Q8N6H7 521 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 ANKFN1Q8N957 763 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 LILRB1Q8NHL6 650 aaPredicted RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 PIWIL2Q8TC59 973 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 CNOT9Q92600 299 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 ARL5BQ96KC2 179 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 TRNT1Q96Q11 434 aaKnown RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 INPP5KQ9BT40 448 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 MTHFD2LQ9H903 347 aaPredicted RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 ZNF701Q9NV72 531 aaPredicted RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 AIG1Q9NVV5 245 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 THAP1Q9NVV9 213 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 CHRNA9Q9UGM1 479 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 LIPT1Q9Y234 373 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 GPR45Q9Y5Y3 372 aa7.89□□□□□ -1.15
COPB1-211ENST00000534234 SPIN1Q9Y657 262 aaPredicted RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 ZNF469Q96JG9 3925 aaPredicted RBP7.89□□□□□ -1.15
COPB1-211ENST00000534234 FLNAP21333 2647 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms