RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 KIAA0513O60268 411 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 PROCP04070 461 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 PGRP06401 933 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 ABHD2P08910 425 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 LINC00032P0C843 101 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 NEFHP12036 1026 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 APOBEC3AP31941 199 aaPredicted RBP13.09□□□□□ -0.31
CTSB-230ENST00000534149 CCT3P49368 545 aaKnown RBP13.09□□□□□ -0.31
CTSB-230ENST00000534149 SESN3P58005 492 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 NAA20P61599 178 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 CSNK2A1P68400 391 aaPredicted RBP13.09□□□□□ -0.31
CTSB-230ENST00000534149 SKP2Q13309 424 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 PDK3Q15120 406 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 CARTPTQ16568 116 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 SPDYE7PQ495Y7 208 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 GALNTL6Q49A17 601 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 SYT14P1Q58G82 188 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 C9orf135Q5VTT2 229 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 LIPNQ5VXI9 398 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 LIPMQ5VYY2 423 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 R3HCC1LQ7Z5L2 792 aaKnown RBP13.09□□□□□ -0.31
CTSB-230ENST00000534149 MTDHQ86UE4 582 aaKnown RBP13.09□□□□□ -0.31
CTSB-230ENST00000534149 WDR31Q8NA23 367 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 OR56A1Q8NGH5 318 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 OR52E4Q8NGH9 312 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 FBXO17Q96EF6 278 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 MUS81Q96NY9 551 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 SORCS2Q96PQ0 1159 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 TRMOQ9BU70 441 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 TUBB1Q9H4B7 451 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 FKRPQ9H9S5 495 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 SERINC1Q9NRX5 453 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 MALT1Q9UDY8 824 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 TBK1Q9UHD2 729 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 DCDC2Q9UHG0 476 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 FKBP7Q9Y680 259 aa13.09□□□□□ -0.31
CTSB-230ENST00000534149 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 SERINC4A6NH21 518 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 AZIN1O14977 448 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 LSM1O15116 133 aaKnown RBP13.08□□□□□ -0.32
CTSB-230ENST00000534149 SCAMP2O15127 329 aaKnown RBP13.08□□□□□ -0.32
CTSB-230ENST00000534149 GLRA3O75311 464 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 KRT16P08779 473 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 TFPIP10646 304 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 LAMP1P11279 417 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 BCKDHAP12694 445 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 HPCAL1P37235 193 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 ASMTP46597 345 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 DNAJB13P59910 316 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 PHC1P78364 1004 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 SQLEQ14534 574 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 OR7E24Q6IFN5 339 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
CTSB-230ENST00000534149 OR5D16Q8NGK9 328 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 MZB1Q8WU39 189 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 ST8SIA1Q92185 356 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 C1orf159Q96HA4 380 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 OR7D2Q96RA2 312 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 LAT2Q9GZY6 243 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 PSMC3IPQ9P2W1 217 aaPredicted RBP13.08□□□□□ -0.32
CTSB-230ENST00000534149 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 TMED5Q9Y3A6 229 aa13.08□□□□□ -0.32
CTSB-230ENST00000534149 A0A1W2PPM1 405 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 NDUFS8O00217 210 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 WIPF1O43516 503 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 DNAJA2O60884 412 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 MRPL33O75394 65 aaKnown RBP13.07□□□□□ -0.32
CTSB-230ENST00000534149 C6orf47O95873 294 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 TGFAP01135 160 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 UBTFL6P0CB48 400 aaPredicted RBP13.07□□□□□ -0.32
CTSB-230ENST00000534149 GPR68Q15743 365 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 SWI5Q1ZZU3 235 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 MST1LQ2TV78 715 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 CR1LQ2VPA4 569 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 IQCCQ4KMZ1 466 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 CASP12Q6UXS9 341 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 OLIG3Q7RTU3 272 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 LSRQ86X29 649 aaPredicted RBP13.07□□□□□ -0.32
CTSB-230ENST00000534149 OR5AK3PQ8NH89 298 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
CTSB-230ENST00000534149 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 ARL5BQ96KC2 179 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 FOXN4Q96NZ1 517 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 SDF2Q99470 211 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 C12orf65Q9H3J6 166 aaKnown RBP13.07□□□□□ -0.32
CTSB-230ENST00000534149 SLC17A5Q9NRA2 495 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 GIMAP2Q9UG22 337 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 KCNE5Q9UJ90 142 aa13.07□□□□□ -0.32
CTSB-230ENST00000534149 PDLIM1O00151 329 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 GPR171O14626 319 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 RIPK2O43353 540 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 PLIN3O60664 434 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 CSTAP01040 98 aa13.06□□□□□ -0.32
CTSB-230ENST00000534149 DDX5P17844 614 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms