RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 DBPQ10586 325 aaPredicted RBP15.36■□□□□ 0.05
CTSB-228ENST00000533455 SNTB2Q13425 540 aaKnown RBP15.36■□□□□ 0.05
CTSB-228ENST00000533455 FGL2Q14314 439 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 CDK5R1Q15078 307 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 ZNF613Q6PF04 617 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 USP53Q70EK8 1073 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 SYS1Q8N2H4 156 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
CTSB-228ENST00000533455 OR4C6Q8NH72 309 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 THAP4Q8WY91 577 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 GSDMCQ9BYG8 508 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 BRD7Q9NPI1 651 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 THAP10Q9P2Z0 257 aaPredicted RBP15.36■□□□□ 0.05
CTSB-228ENST00000533455 UBQLN2Q9UHD9 624 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 CLEC4AQ9UMR7 237 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 SLC17A4Q9Y2C5 497 aa15.36■□□□□ 0.05
CTSB-228ENST00000533455 PCDHGA9Q9Y5G4 932 aaKnown RBP15.36■□□□□ 0.05
CTSB-228ENST00000533455 TRAV27A0A087WT01 109 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 A0A0B4J203 849 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 G3V3Q6 166 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 PPP1R3DO95685 299 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 GDI2P50395 445 aaKnown RBP15.35■□□□□ 0.05
CTSB-228ENST00000533455 ZNF81P51508 661 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 SRP54P61011 504 aaKnown RBP15.35■□□□□ 0.05
CTSB-228ENST00000533455 FGFBP1Q14512 234 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 POU4F3Q15319 338 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 GRK1Q15835 563 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 UBE2NLQ5JXB2 153 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 FAM69AQ5T7M9 428 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 FCRLBQ6BAA4 426 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 ARHGAP11AQ6P4F7 1023 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 SLITRK4Q8IW52 837 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 ZNF436Q9C0F3 470 aaPredicted RBP15.35■□□□□ 0.05
CTSB-228ENST00000533455 C20orf85Q9H1P6 137 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 MEPEQ9NQ76 525 aaPredicted RBP15.35■□□□□ 0.05
CTSB-228ENST00000533455 DUSP22Q9NRW4 184 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 FBXL4Q9UKA2 621 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 FBXL21Q9UKT6 434 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 SPEF1Q9Y4P9 236 aa15.35■□□□□ 0.05
CTSB-228ENST00000533455 A0A1B0GTQ1 180 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 KHNYNO15037 678 aaKnown RBP15.34■□□□□ 0.05
CTSB-228ENST00000533455 MID1O15344 667 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 PRAF2O60831 178 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 PEX14O75381 377 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ITGA10O75578 1167 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SMIM10L1P0DMW3 83 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 CPMP14384 443 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ENPP1P22413 925 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 GDNFP39905 211 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 CAMK1Q14012 370 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 COMMD7Q86VX2 200 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ZNF527Q8NB42 609 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 CYB561A3Q8NBI2 242 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 OR6C4Q8NGE1 309 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SMAP2Q8WU79 429 aaPredicted RBP15.34■□□□□ 0.05
CTSB-228ENST00000533455 PMM1Q92871 262 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SMIM10Q96HG1 83 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 LCORQ96JN0 433 aaPredicted RBP15.34■□□□□ 0.05
CTSB-228ENST00000533455 LRFN5Q96NI6 719 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SERINC2Q96SA4 455 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 STACQ99469 402 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 EVA1AQ9H8M9 152 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ZDHHC4Q9NPG8 344 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ICAM5Q9UMF0 924 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 MRPS7Q9Y2R9 242 aaKnown RBP15.34■□□□□ 0.05
CTSB-228ENST00000533455 TUBAL3A6NHL2 446 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 PEX12O00623 359 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SSNA1O43805 119 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 TGM6O95932 706 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 IFNGP01579 166 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 POU2F2P09086 479 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SLC6A6P31641 620 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 GBX2P52951 348 aaPredicted RBP15.34■□□□□ 0.05
CTSB-228ENST00000533455 RPS11P62280 158 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTSB-228ENST00000533455 ACTA2P62736 377 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 SNRPNP63162 240 aaKnown RBP15.34■□□□□ 0.05
CTSB-228ENST00000533455 ACTG2P63267 376 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 PLAURQ03405 335 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 PUDPQ08623 228 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 GGTLC2Q14390 218 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 TP53I3Q53FA7 332 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 RTL4Q6ZR62 310 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ESPNLQ6ZVH7 1005 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 GLRX5Q86SX6 157 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 RFLNBQ8N5W9 214 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 BEST4Q8NFU0 473 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 POF1BQ8WVV4 589 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 PELI1Q96FA3 418 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 RBP7Q96R05 134 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 ZNF559Q9BR84 538 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 RNF208Q9H0X6 261 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 AUNIPQ9H7T9 357 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 HEBP2Q9Y5Z4 205 aa15.34■□□□□ 0.05
CTSB-228ENST00000533455 A0A087WV62 115 aa15.33■□□□□ 0.04
CTSB-228ENST00000533455 I3L521 148 aa15.33■□□□□ 0.04
CTSB-228ENST00000533455 AK1P00568 194 aa15.33■□□□□ 0.04
CTSB-228ENST00000533455 TIMP1P01033 207 aa15.33■□□□□ 0.04
CTSB-228ENST00000533455 TFP02787 698 aa15.33■□□□□ 0.04
CTSB-228ENST00000533455 SIM1P81133 766 aaPredicted RBP15.33■□□□□ 0.04
CTSB-228ENST00000533455 RUNX2Q13950 521 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms