RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 BLOC1S3Q6QNY0 202 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 GRINAQ7Z429 371 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 FUNDC1Q8IVP5 155 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 SLC43A2Q8N370 569 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 SLC25A43Q8WUT9 341 aaPredicted RBP27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 C12orf49Q9H741 205 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 GP6Q9HCN6 339 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 CTPS2Q9NRF8 586 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 THUMPD1Q9NXG2 353 aaKnown RBP27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 ZNF226Q9NYT6 803 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 KLHL13Q9P2N7 655 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 EDARQ9UNE0 448 aa27.01■■□□□ 1.91
SSSCA1-207ENST00000533115 IGHV3-15A0A0B4J1V0 119 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 SASH3O75995 380 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 TFPTP0C1Z6 253 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 IDH2P48735 452 aaKnown RBP27■■□□□ 1.91
SSSCA1-207ENST00000533115 SYT14P1Q58G82 188 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 BEND4Q6ZU67 534 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 STK32CQ86UX6 486 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 TUSC5Q8IXB3 177 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 PEX5LQ8IYB4 626 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 SLC38A5Q8WUX1 472 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 FANCFQ9NPI8 374 aa27■■□□□ 1.91
SSSCA1-207ENST00000533115 SPIN1Q9Y657 262 aaPredicted RBP27■■□□□ 1.91
SSSCA1-207ENST00000533115 DSPPQ9NZW4 1301 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 BCHEP06276 602 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 ART1P52961 327 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 CRISP3P54108 245 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 MRPL2Q5T653 305 aaKnown RBP26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 ZNF550Q7Z398 422 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 PLEKHF2Q9H8W4 249 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 CCDC167Q9P0B6 97 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 CHRNA9Q9UGM1 479 aa26.99■■□□□ 1.91
SSSCA1-207ENST00000533115 A0A096LPI6 279 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 CLIC1O00299 241 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 AP3D1O14617 1153 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 YES1P07947 543 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 HOXB9P17482 250 aaPredicted RBP26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 DIO1P49895 249 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 ATP4BP51164 291 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 IRX1P78414 480 aaPredicted RBP26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 SPNS3Q6ZMD2 512 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 TMPPEQ6ZT21 453 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 OR52P1PQ8NH57 321 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 SPDL1Q96EA4 605 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 TACO1Q9BSH4 297 aaKnown RBP26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 RAD21L1Q9H4I0 556 aa26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 CCM2LQ9NUG4 571 aaPredicted RBP26.98■■□□□ 1.91
SSSCA1-207ENST00000533115 TMEM247A6NEH6 219 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 NR5A2O00482 541 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 TFPIP10646 304 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 CRYGSP22914 178 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 FKBP2P26885 142 aaKnown RBP26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 HTR3AP46098 478 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 CSNK2A1P68400 391 aaPredicted RBP26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 RGNQ15493 299 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 ANKRD34AQ69YU3 496 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 STAC2Q6ZMT1 411 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 NUFIP2Q7Z417 695 aaKnown RBP26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 ADGRG3Q86Y34 549 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 PSD2Q9BQI7 771 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 SLC52A3Q9NQ40 469 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 TMEM45AQ9NWC5 275 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 C6orf203Q9P0P8 240 aaPredicted RBP26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 KLHL9Q9P2J3 617 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 PLEKHA6Q9Y2H5 1048 aa26.97■■□□□ 1.91
SSSCA1-207ENST00000533115 F8P00451 2351 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 SULT2B1O00204 365 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 FAAHO00519 579 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 SMAD9O15198 467 aaKnown RBP26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 CYTIPO60759 359 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 DNASE1P24855 282 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 LIN52Q52LA3 116 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 PAMR1Q6UXH9 720 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 C22orf34Q6ZV56 151 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 VRK2Q86Y07 508 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 STON2Q8WXE9 905 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 TMEM19Q96HH6 336 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 BCO1Q9HAY6 547 aa26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 ING1Q9UK53 422 aaPredicted RBP26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 TEP1Q99973 2627 aaKnown RBP26.96■■□□□ 1.91
SSSCA1-207ENST00000533115 HIVEP1P15822 2718 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 A0A0G2JPF8 293 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 CDHR4A6H8M9 788 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 CFAP73A6NFT4 308 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 DEFB108AA8MXU0 73 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 HNRNPCL2B2RXH8 293 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 HNRNPCL3B7ZW38 293 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 SIAH2O43255 324 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 HNRNPCL1O60812 293 aaKnown RBP26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 HNRNPCL4P0DMR1 293 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 UQCRBP14927 111 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 CD1EP15812 388 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 PPP3CBP16298 524 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 RASGEF1BQ0VAM2 473 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 EPS8Q12929 822 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 FADDQ13158 208 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 SQLEQ14534 574 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 AGKQ53H12 422 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 RPS26P11Q5JNZ5 115 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms