RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ADGRG3Q86Y34 549 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 PCYOX1LQ8NBM8 494 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 ACBD4Q8NC06 268 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 RELL2Q8NC24 303 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-209ENST00000532725 C11orf65Q8NCR3 313 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 HIPK4Q8NE63 616 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 ATP6V1C2Q8NEY4 427 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 OR8J3Q8NGG0 315 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 SH3GL1Q99961 368 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 ARMC7Q9H6L4 198 aa17.82■□□□□ 0.44
CPSF1-209ENST00000532725 GJE1A6NN92 205 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 AQP8O94778 261 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 PRKAR1BP31321 381 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 SLC1A3P43003 542 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 CYP51A1Q16850 503 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 ZNF787Q6DD87 383 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 CALHM3Q86XJ0 350 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 KRT73Q86Y46 540 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 ZZZ3Q8IYH5 903 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 ADAM19Q9H013 955 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 ENKD1Q9H0I2 346 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 RNF122Q9H9V4 155 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 CACYBPQ9HB71 228 aaKnown RBP17.81■□□□□ 0.44
CPSF1-209ENST00000532725 NPDC1Q9NQX5 325 aaPredicted RBP17.81■□□□□ 0.44
CPSF1-209ENST00000532725 CTPS2Q9NRF8 586 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 SERINC1Q9NRX5 453 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 GID8Q9NWU2 228 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 JKAMPQ9P055 326 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 CRYBG3Q68DQ2 2970 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 UNC79Q9P2D8 2635 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 PKDREJQ9NTG1 2253 aa17.81■□□□□ 0.44
CPSF1-209ENST00000532725 CELSR2Q9HCU4 2923 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 TPST1O60507 370 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 TNFSF13O75888 250 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 CRHP06850 196 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 PRG2P13727 222 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 HTR3AP46098 478 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 PCBP3P57721 371 aaKnown RBP17.8■□□□□ 0.44
CPSF1-209ENST00000532725 OR2A2Q6IF42 318 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 DHRS4L2Q6PKH6 230 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 ZNF550Q7Z398 422 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 GCNT2Q8N0V5 402 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 SLC35B4Q969S0 331 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 RCN3Q96D15 328 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 ZNF607Q96SK3 696 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 SPATA5L1Q9BVQ7 753 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 SFXN3Q9BWM7 321 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 COQ10BQ9H8M1 238 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 OSGIN1Q9UJX0 560 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 NBPF19A0A087WUL8 3843 aa17.8■□□□□ 0.44
CPSF1-209ENST00000532725 M0QX08 132 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 SYT5O00445 386 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 SERPINB7O75635 380 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 MFN2O95140 757 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 IGFBP2P18065 325 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 AQP1P29972 269 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 KIR2DL2P43627 348 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-209ENST00000532725 GUSBP1Q15486 140 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 EEF1A1P5Q5VTE0 462 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 C3orf33Q6P1S2 294 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 COMTD1Q86VU5 262 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 ZNF583Q96ND8 569 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 SPOCK3Q9BQ16 436 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 ECSITQ9BQ95 431 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 GPATCH1Q9BRR8 931 aaKnown RBP17.79■□□□□ 0.44
CPSF1-209ENST00000532725 SRXN1Q9BYN0 137 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 PIF1Q9H611 641 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 TIGARQ9NQ88 270 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 CHRNA9Q9UGM1 479 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 MCTS1Q9ULC4 181 aaKnown RBP17.79■□□□□ 0.44
CPSF1-209ENST00000532725 ANGPT4Q9Y264 503 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 HCFC1P51610 2035 aa17.79■□□□□ 0.44
CPSF1-209ENST00000532725 TMED7-TICAM2A0A0A6YYA0 188 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 A0A1W2PNR3 127 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 A0A1W2PNV4 684 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 UQCRBP14927 111 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 FKBP2P26885 142 aaKnown RBP17.78■□□□□ 0.44
CPSF1-209ENST00000532725 TACR3P29371 465 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 POLR2HP52434 150 aaKnown RBP17.78■□□□□ 0.44
CPSF1-209ENST00000532725 RAC3P60763 192 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 DMTNQ08495 405 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 VMACQ2NL98 169 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 FBXL19-AS1Q494R0 122 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 GLIPR1L2Q4G1C9 344 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 SLC30A8Q8IWU4 369 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 SLC25A43Q8WUT9 341 aaPredicted RBP17.78■□□□□ 0.44
CPSF1-209ENST00000532725 STARD4Q96DR4 205 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 CCT8L2Q96SF2 557 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 PRRG4Q9BZD6 226 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 EFCAB1Q9HAE3 211 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 ARL2BPQ9Y2Y0 163 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 TMED7Q9Y3B3 224 aa17.78■□□□□ 0.44
CPSF1-209ENST00000532725 PRORSD1PA6NEY8 169 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 CYSRT1A8MQ03 144 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 AIM2O14862 343 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 FRS3O43559 492 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 SYNGR4O95473 234 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 FCGR2AP12318 317 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 SLC7A1P30825 629 aa17.77■□□□□ 0.44
CPSF1-209ENST00000532725 PCGF2P35227 344 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms