RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ST14Q9Y5Y6 855 aa10.53□□□□□ -0.72
PTPRK-221ENST00000532331 SLC5A10A0PJK1 596 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 MEGF11A6BM72 1044 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 F5H5K5 113 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 TNFSF14O43557 240 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 SFTPBP07988 381 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 DEFA5Q01523 94 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 TRA2AQ13595 282 aaKnown RBP eCLIP10.52□□□□□ -0.725e-6■■■■□ 22.5
PTPRK-221ENST00000532331 EIF2B1Q14232 305 aaKnown RBP10.52□□□□□ -0.72
PTPRK-221ENST00000532331 PROX2Q3B8N5 592 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 ASRGL1Q7L266 308 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 SP7Q8TDD2 431 aaPredicted RBP10.52□□□□□ -0.72
PTPRK-221ENST00000532331 UBTD2Q8WUN7 234 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 CLMPQ9H6B4 373 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 KCNIP1Q9NZI2 227 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 COPZ2Q9P299 210 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 DSCR3O14972 297 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 IGHG1P01857 330 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 NME1P15531 152 aaKnown RBP10.52□□□□□ -0.72
PTPRK-221ENST00000532331 PITPNBP48739 271 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 KCNJ10P78508 379 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 KEAP1Q14145 624 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 ELAVL1Q15717 326 aaKnown RBP10.52□□□□□ -0.72
PTPRK-221ENST00000532331 FAM111BQ6SJ93 734 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 AAED1Q7RTV5 226 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 PRICKLE2Q7Z3G6 844 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 TMEM151AQ8N4L1 468 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 PPP1R35Q8TAP8 253 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.72
PTPRK-221ENST00000532331 CALHM2Q9HA72 323 aa10.52□□□□□ -0.72
PTPRK-221ENST00000532331 TRGV8A0A0C4DH27 118 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 CENPBD1B2RD01 187 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 EIF1P41567 113 aaKnown RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 SLC35A1P78382 337 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 C18orf63Q68DL7 685 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 VHLLQ6RSH7 139 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 PIAS4Q8N2W9 510 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 FUNDC2Q9BWH2 189 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 IER3IP1Q9Y5U9 82 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 PRAMEF25A6NGN4 478 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 FRS3O43559 492 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 GLSO94925 669 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 MTHFD2P13995 350 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 ENPP1P22413 925 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 SRSF5Q13243 272 aaKnown RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 ATXN7L3Q14CW9 347 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 AWAT2Q6E213 333 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 TMEM92Q6UXU6 159 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 STT3BQ8TCJ2 826 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 GORASP2Q9H8Y8 452 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 MAGED1Q9Y5V3 778 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 BORCS7-ASMTA0A0B4J1R7 106 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 UTS2O95399 124 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 CEACAM5P06731 702 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 TMEM225BP0DP42 221 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 HOXC8P31273 242 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 RPS5P46782 204 aaKnown RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 GLO1Q04760 184 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 SNTB2Q13425 540 aaKnown RBP10.52□□□□□ -0.73
PTPRK-221ENST00000532331 ARL6IP1Q15041 203 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 ABHD17CQ6PCB6 329 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 OR51L1Q8NGJ5 315 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 TCEAL3Q969E4 200 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 TEX101Q9BY14 249 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 DNTTIP1Q9H147 329 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 LYRM4Q9HD34 91 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 C14orf119Q9NWQ9 140 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 HIF3AQ9Y2N7 669 aa10.52□□□□□ -0.73
PTPRK-221ENST00000532331 C12orf71A8MTZ7 269 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 PPP6CO00743 305 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 LSM1O15116 133 aaKnown RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 MRPS14O60783 128 aaKnown RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 H2AFB2P0C5Z0 115 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ST6GAL1P15907 406 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ERP29P30040 261 aaKnown RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 PRKXP51817 358 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 TMEM205Q6UW68 189 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF704Q6ZNC4 412 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 BAHD1Q8TBE0 780 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 SCGB1C1Q8TD33 95 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 C3orf30Q96M34 536 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 SLC30A3Q99726 388 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 MENTQ9BUN1 341 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ALG8Q9BVK2 526 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 USP36Q9P275 1121 aaKnown RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 KCNN3Q9UGI6 736 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF223Q9UK11 482 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 NME7Q9Y5B8 376 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 CXorf51AA0A1B0GTR3 108 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF891A8MT65 544 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 HBMQ6B0K9 141 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 MED25Q71SY5 747 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 NAXDQ8IW45 347 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 SYT4Q9H2B2 425 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 TAS2R8Q9NYW2 309 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 SLC6A5Q9Y345 797 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms