RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LAMP3Q9UQV4 416 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 FREM1Q5H8C1 2179 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 C9JVG2 144 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 SULT2B1O00204 365 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 LYZL6O75951 148 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 FESP07332 822 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 LBPP18428 481 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 APOBEC1P41238 236 aaKnown RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 KHKP50053 298 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 CLNS1AP54105 237 aaKnown RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 SPANXN4Q5MJ08 99 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 FRRS1Q6ZNA5 592 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF563Q8TA94 476 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 PIWIL2Q8TC59 973 aaKnown RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF775Q96BV0 537 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 CCDC106Q9BWC9 280 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 NUF2Q9BZD4 464 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
CPSF1-207ENST00000531727 MARCOQ9UEW3 520 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.9□□□□□ -0.021e-7■■■□□ 15
CPSF1-207ENST00000531727 SPIN1Q9Y657 262 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 V9GYY5 206 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-207ENST00000531727 E9PBE3 544 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 OVOL3O00110 214 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 BCAS1O75363 584 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-207ENST00000531727 COX5AP20674 150 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 BGNP21810 368 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 EDNRAP25101 427 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 CHI3L1P36222 383 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-207ENST00000531727 BSPH1Q075Z2 132 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 STX3Q13277 289 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 FAM174BQ3ZCQ3 159 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 ZNF672Q499Z4 452 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-207ENST00000531727 ABLIM2Q6H8Q1 611 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 GALNT5Q7Z7M9 940 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 ATG4DQ86TL0 474 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-207ENST00000531727 SLC35A5Q9BS91 424 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 CTPS2Q9NRF8 586 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 EMC3Q9P0I2 261 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 CHRNA9Q9UGM1 479 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 NAV3Q8IVL0 2385 aa14.89□□□□□ -0.03
CPSF1-207ENST00000531727 PRR14LQ5THK1 2151 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 IGKV3D-15A0A087WSY6 115 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 PRAMEF27A3QJZ7 478 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 DPRXA6NFQ7 191 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 SOD3P08294 240 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 DANCRP0C864 163 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 TFPIP10646 304 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 IGHV1-2P23083 117 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 S100A3P33764 101 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 MPP2Q14168 576 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 PDK3Q15120 406 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 PPA1Q15181 289 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 STK11Q15831 433 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 GPAT3Q53EU6 434 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 TNFAIP8L3Q5GJ75 292 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 OGFOD2Q6N063 350 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.88□□□□□ -0.03
CPSF1-207ENST00000531727 GRINAQ7Z429 371 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 MTDHQ86UE4 582 aaKnown RBP14.88□□□□□ -0.03
CPSF1-207ENST00000531727 ZNF100Q8IYN0 542 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 KBTBD8Q8NFY9 601 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 SMAP2Q8WU79 429 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-207ENST00000531727 NEUROG1Q92886 237 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 ZG16BQ96DA0 208 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 MUCL1Q96DR8 90 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 ZHX1-C8orf76Q96EF9 292 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 CCDC115Q96NT0 180 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 PARD6BQ9BYG5 372 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 CENPHQ9H3R5 247 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 EXOSC3Q9NQT5 275 aaKnown RBP14.88□□□□□ -0.03
CPSF1-207ENST00000531727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-207ENST00000531727 PNPOQ9NVS9 261 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 BTNL2Q9UIR0 455 aa14.88□□□□□ -0.03
CPSF1-207ENST00000531727 A0A1W2PP18 115 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 HMGN4O00479 90 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 DNPH1O43598 174 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 PMS2P2O95744 297 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 C1QCP02747 245 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 ALDOCP09972 364 aaKnown RBP14.87□□□□□ -0.03
CPSF1-207ENST00000531727 GGT1P19440 569 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 FKBP2P26885 142 aaKnown RBP14.87□□□□□ -0.03
CPSF1-207ENST00000531727 PCSK6P29122 969 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 RYKP34925 604 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 CLK1P49759 484 aaKnown RBP14.87□□□□□ -0.03
CPSF1-207ENST00000531727 KCNJ10P78508 379 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 HPCAP84074 193 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 PLAURQ03405 335 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 CHRNEQ04844 493 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 TNK1Q13470 666 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 TIMM23BQ5SRD1 257 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 DNAJC14Q6Y2X3 702 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-207ENST00000531727 SSX8Q7RTT4 187 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 HMGN2P46Q86SG4 172 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 P2RY8Q86VZ1 359 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 ARFGAP2Q8N6H7 521 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 TRMT61AQ96FX7 289 aaKnown RBP14.87□□□□□ -0.03
CPSF1-207ENST00000531727 TEX37Q96LM6 180 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 TRIM2Q9C040 744 aa14.87□□□□□ -0.03
CPSF1-207ENST00000531727 KCNK9Q9NPC2 374 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms