RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 TFDP1Q14186 410 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 SF3A2Q15428 464 aaKnown RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 CHI3L2Q15782 390 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 KNOP1Q1ED39 458 aaKnown RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 ZNF284Q2VY69 593 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 LRRC37A5PQ49AS3 106 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 FAM78AQ5JUQ0 283 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 PIK3CD-AS1Q5SR53 167 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 STPG1Q5TH74 334 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 GPR157Q5UAW9 335 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 FAM71F2Q6NXP2 309 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 VITQ6UXI7 678 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 Q6ZS52 159 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 SLC16A12Q6ZSM3 486 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 RHOUQ7L0Q8 258 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 NKAIN4Q8IVV8 208 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 CHERPQ8IWX8 916 aaKnown RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 NAGSQ8N159 534 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 ZNF565Q8N9K5 539 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 NFAM1Q8NET5 270 aaPredicted RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 ANGPTL6Q8NI99 470 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 NRGNQ92686 78 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 ALS2CR12Q96Q35 445 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 SLC38A2Q96QD8 506 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 ERGIC2Q96RQ1 377 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 OR2AG1Q9H205 316 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 ZNF334Q9HCZ1 680 aaPredicted RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 XPNPEP1Q9NQW7 623 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 GDF3Q9NR23 364 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATM-216ENST00000531525 TMEM45AQ9NWC5 275 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 SMARCAL1Q9NZC9 954 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 ING1Q9UK53 422 aaPredicted RBP5.63□□□□□ -1.51
ATM-216ENST00000531525 CBY1Q9Y3M2 126 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 ACACAQ13085 2346 aa5.63□□□□□ -1.51
ATM-216ENST00000531525 TNRC6BQ9UPQ9 1833 aaKnown RBP5.62□□□□□ -1.51
ATM-216ENST00000531525 ABCA7Q8IZY2 2146 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 PTPRDP23468 1912 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 A0A1B0GUA9 196 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 MEX3AA1L020 520 aaKnown RBP5.62□□□□□ -1.51
ATM-216ENST00000531525 GRID2IPA4D2P6 1211 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 TRPC5OSA6NMA1 111 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 SERPINE3A8MV23 424 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CFLARO15519 480 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 RS1O15537 224 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 TSPAN2O60636 221 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 STX11O75558 287 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CBR3O75828 277 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 APOHP02749 345 aaPredicted RBP5.62□□□□□ -1.51
ATM-216ENST00000531525 ZNF806P0C7X5 589 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CD59P13987 128 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 MAKP20794 623 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CCNE1P24864 410 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 HOXA6P31267 233 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CCR2P41597 374 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 ISL1P61371 349 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 EWSR1Q01844 656 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATM-216ENST00000531525 GPR50Q13585 617 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CCDC6Q16204 474 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 WSCD1Q658N2 575 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 OR4C11Q6IEV9 310 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 SLC8B1Q6J4K2 584 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 NELFCDQ8IXH7 590 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 DNAAF3Q8N9W5 541 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 MFSD9Q8NBP5 474 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 TMEM104Q8NE00 496 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 OR2L3Q8NG85 312 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 MARCH1Q8TCQ1 289 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 WFIKKN2Q8TEU8 576 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 SMARCD2Q92925 531 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 PIGTQ969N2 578 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 MYLPFQ96A32 169 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 TCEAL4Q96EI5 215 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 PCED1BQ96HM7 432 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 BBC3Q96PG8 261 aaPredicted RBP5.62□□□□□ -1.51
ATM-216ENST00000531525 SORCS2Q96PQ0 1159 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 CSF3RQ99062 836 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 TMEM246Q9BRR3 403 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 HINT2Q9BX68 163 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 PARD6BQ9BYG5 372 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 LRRN3Q9H3W5 708 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 ZNF275Q9NSD4 429 aaPredicted RBP5.62□□□□□ -1.51
ATM-216ENST00000531525 C2orf42Q9NWW7 574 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 GGA2Q9UJY4 613 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 PACSIN3Q9UKS6 424 aa5.62□□□□□ -1.51
ATM-216ENST00000531525 PRPF19Q9UMS4 504 aaKnown RBP5.62□□□□□ -1.51
ATM-216ENST00000531525 GOLGA8QA0A0J9YX86 632 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 GOLGA6L9A6NEM1 432 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 PDZK1P1A8MUH7 402 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 A8MXQ7 604 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 F8VZ95 297 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 OVOL3O00110 214 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 TRAFD1O14545 582 aaPredicted RBP5.61□□□□□ -1.51
ATM-216ENST00000531525 BUD23O43709 281 aaKnown RBP5.61□□□□□ -1.51
ATM-216ENST00000531525 NXPH2O95156 264 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 ATP1B2P14415 290 aaPredicted RBP5.61□□□□□ -1.51
ATM-216ENST00000531525 ARSBP15848 533 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 ACADSP16219 412 aa5.61□□□□□ -1.51
ATM-216ENST00000531525 POLR2CP19387 275 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms