RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 SIRT7Q9NRC8 400 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 SLC17A7Q9P2U7 560 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 AASSQ9UDR5 926 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 CD207Q9UJ71 328 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 PSG11Q9UQ72 335 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 OSGIN2Q9Y236 505 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 RNF6Q9Y252 685 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 ADAM18Q9Y3Q7 739 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 LYVE1Q9Y5Y7 322 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 KIAA1551Q9HCM1 1747 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 ANKRD36CQ5JPF3 1778 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 ADGRB1O14514 1584 aa5.16□□□□□ -1.58
CD44-231ENST00000531110 RIMBP3CA6NJZ7 1639 aa5.15□□□□□ -1.58
CD44-231ENST00000531110 RIMBP3BA6NNM3 1639 aa5.15□□□□□ -1.58
CD44-231ENST00000531110 LRP5O75197 1615 aa5.15□□□□□ -1.58
CD44-231ENST00000531110 RAPGEF6Q8TEU7 1601 aa5.15□□□□□ -1.58
CD44-231ENST00000531110 MTCL1Q9Y4B5 1905 aaKnown RBP5.15□□□□□ -1.58
CD44-231ENST00000531110 TRPM2O94759 1503 aa5.15□□□□□ -1.58
CD44-231ENST00000531110 IGLV5-39A0A0G2JS06 123 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 ATP6AP2A0A1C7CYW4 349 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 GSAPA4D1B5 854 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 CXorf65A6NEN9 183 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 FABP12A6NFH5 140 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SDR42E2A6NKP2 422 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 A6NLC8 198 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 WASHC1A8K0Z3 465 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 C1orf196B1AJZ1 125 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 B9A039 149 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 WASH3PC4AMC7 463 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 TP53I11O14683 189 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 MED7O43513 233 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 LCMT2O60294 686 aaKnown RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 DOK2O60496 412 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SCN2BO60939 215 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SLCO2B1O94956 709 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 PAPSS2O95340 614 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 MOCS2O96007 188 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 TOMM40O96008 361 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 HLA-DQB1P01920 261 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 LIPFP07098 398 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 F7P08709 466 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 CSF1P09603 554 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 UBA1P22314 1058 aaKnown RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 LMO1P25800 156 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 MAS1LP35410 378 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 NAA10P41227 235 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 KCNJ3P48549 501 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 CDC34P49427 236 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 KLF3P57682 345 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 RRAS2P62070 204 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 DHODHQ02127 395 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SCN1BQ07699 218 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 C17orf67Q0P5P2 114 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 PMPCAQ10713 525 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 NME3Q13232 169 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SCGB2A2Q13296 93 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 GPR17Q13304 367 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 GPR68Q15743 365 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 C5orf64Q2M2E5 130 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 PIGGQ5H8A4 983 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SPANXN2Q5MJ10 180 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 CBWD5Q5RIA9 395 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 TPRG1LQ5T0D9 272 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 C10orf91Q5T1B1 145 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SYT6Q5T7P8 510 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 PIP5KL1Q5T9C9 394 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 LCN1P1Q5VSP4 162 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 MEDAGQ5VYS4 303 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 MOXD1Q6UVY6 613 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 WASH2PQ6VEQ5 465 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 MBOAT1Q6ZNC8 495 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 ADIPOR2Q86V24 386 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 PIM3Q86V86 326 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 COMMD2Q86X83 199 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 C15orf54Q8N8G6 183 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 AGBL3Q8NEM8 1001 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 OR5J2Q8NH18 312 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 MCFD2Q8NI22 146 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 ACTL9Q8TC94 416 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 AP3S1Q92572 193 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 LPAR1Q92633 364 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 SLC38A4Q969I6 547 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 FAF2Q96CS3 445 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 CMBLQ96DG6 245 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 ASB9Q96DX5 294 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 OR2A14Q96R47 310 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 NIPSNAP1Q9BPW8 284 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 ZNF426Q9BUY5 554 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 CDC42EP4Q9H3Q1 356 aaKnown RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 MUC13Q9H3R2 512 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 TRABDQ9H4I3 376 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 CHODLQ9H9P2 273 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 RANGRFQ9HD47 186 aaPredicted RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 CCNB1IP1Q9NPC3 277 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 PNRC2Q9NPJ4 139 aaKnown RBP5.15□□□□□ -1.59
CD44-231ENST00000531110 ABCB10Q9NRK6 738 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 ZFP57Q9NU63 452 aa5.15□□□□□ -1.59
CD44-231ENST00000531110 DDIT4Q9NX09 232 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms