RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 FUT5Q11128 374 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 CAPRIN1Q14444 709 aaKnown RBP13.98□□□□□ -0.17
CPSF1-205ENST00000531042 CASP8Q14790 479 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 DPY19L1Q2PZI1 675 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 SYT14P1Q58G82 188 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 SPANXN4Q5MJ08 99 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 ATAD3BQ5T9A4 648 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 FRRS1Q6ZNA5 592 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 BHLHA15Q7RTS1 189 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-205ENST00000531042 ATG4DQ86TL0 474 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-205ENST00000531042 LRRC34Q8IZ02 419 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 PIWIL2Q8TC59 973 aaKnown RBP13.98□□□□□ -0.17
CPSF1-205ENST00000531042 SLC25A43Q8WUT9 341 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-205ENST00000531042 FBXW5Q969U6 566 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 ROPN1LQ96C74 230 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 ZG16BQ96DA0 208 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 NEURL3Q96EH8 262 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 CCDC106Q9BWC9 280 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 NUF2Q9BZD4 464 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 SLC35A3Q9Y2D2 325 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 OVOL3O00110 214 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 SULT2B1O00204 365 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF500O60304 480 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 BCAS1O75363 584 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 LYZL6O75951 148 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 FESP07332 822 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 LBPP18428 481 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 APOBEC1P41238 236 aaKnown RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 KHKP50053 298 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 CLNS1AP54105 237 aaKnown RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 RPS4XP62701 263 aaKnown RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 CSNK2A1P68400 391 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 MPP2Q14168 576 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 GALNT5Q7Z7M9 940 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF563Q8TA94 476 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 NEUROG1Q92886 237 aa13.97□□□□□ -0.17
CPSF1-205ENST00000531042 MARCOQ9UEW3 520 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-205ENST00000531042 TLN2Q9Y4G6 2542 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 PRAMEF27A3QJZ7 478 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 DPRXA6NFQ7 191 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 E9PBE3 544 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 C1QCP02747 245 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 SOD3P08294 240 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 DANCRP0C864 163 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 IGHV1-2P23083 117 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 S100A3P33764 101 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 RYKP34925 604 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 CHI3L1P36222 383 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 PLAURQ03405 335 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 BSPH1Q075Z2 132 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 STX3Q13277 289 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 PDK3Q15120 406 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 FAM174BQ3ZCQ3 159 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF672Q499Z4 452 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 TNFAIP8L3Q5GJ75 292 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 ABLIM2Q6H8Q1 611 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 MTDHQ86UE4 582 aaKnown RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF100Q8IYN0 542 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 SMAP2Q8WU79 429 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 TEX37Q96LM6 180 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 CCDC115Q96NT0 180 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 SLC35A5Q9BS91 424 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 PARD6BQ9BYG5 372 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 MEAF6Q9HAF1 191 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 CTPS2Q9NRF8 586 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 PNPOQ9NVS9 261 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 CHRNA9Q9UGM1 479 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 BTNL2Q9UIR0 455 aa13.96□□□□□ -0.17
CPSF1-205ENST00000531042 SPIN1Q9Y657 262 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-205ENST00000531042 IGKV3D-15A0A087WSY6 115 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 CLDN24A6NM45 220 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 ZNF716A6NP11 495 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 HMGN4O00479 90 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 PMS2P2O95744 297 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
CPSF1-205ENST00000531042 TFPIP10646 304 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 COX5AP20674 150 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 PCSK6P29122 969 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 KCNJ10P78508 379 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 CHRNEQ04844 493 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 TNK1Q13470 666 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 PPA1Q15181 289 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 STK11Q15831 433 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 GPAT3Q53EU6 434 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 OGFOD2Q6N063 350 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 DNAJC14Q6Y2X3 702 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-205ENST00000531042 GRINAQ7Z429 371 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 HMGN2P46Q86SG4 172 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 ARFGAP2Q8N6H7 521 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 KBTBD8Q8NFY9 601 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 TRMT61AQ96FX7 289 aaKnown RBP13.95□□□□□ -0.18
CPSF1-205ENST00000531042 ARL5BQ96KC2 179 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 TRIM2Q9C040 744 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 CENPHQ9H3R5 247 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 KCNK9Q9NPC2 374 aa13.95□□□□□ -0.18
CPSF1-205ENST00000531042 EXOSC3Q9NQT5 275 aaKnown RBP13.95□□□□□ -0.18
CPSF1-205ENST00000531042 EMC3Q9P0I2 261 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms