RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ZNF136P52737 540 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 WNT4P56705 351 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 PPP1CAP62136 330 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 TGIF1Q15583 401 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 NXNL2Q5VZ03 156 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 C17orf82Q86X59 251 aaPredicted RBP10.83□□□□□ -0.68
USF1-208ENST00000528768 TMEM255BQ8WV15 326 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 MVB12AQ96EY5 273 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 MMABQ96EY8 250 aaPredicted RBP10.83□□□□□ -0.68
USF1-208ENST00000528768 PEX11GQ96HA9 241 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 OPALINQ96PE5 141 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 TGM7Q96PF1 710 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 GPA33Q99795 319 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 TAPBPLQ9BX59 468 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 C6orf62Q9GZU0 229 aaPredicted RBP10.83□□□□□ -0.68
USF1-208ENST00000528768 NUAK2Q9H093 628 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 OR51E2Q9H255 320 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 ZBTB20Q9HC78 741 aaPredicted RBP10.83□□□□□ -0.68
USF1-208ENST00000528768 HCN3Q9P1Z3 774 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 GSTK1Q9Y2Q3 226 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 LSM2Q9Y333 95 aaKnown RBP10.83□□□□□ -0.68
USF1-208ENST00000528768 OR10H1Q9Y4A9 318 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 CHST2Q9Y4C5 530 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 MMACHCQ9Y4U1 282 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 CENPEQ02224 2701 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 TDRD6O60522 2096 aaKnown RBP10.83□□□□□ -0.68
USF1-208ENST00000528768 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 ABCA12Q86UK0 2595 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 A0A075B6Q4 140 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PMS2P1A4D2B8 440 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 FITM1A5D6W6 292 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 TMEM150CB9EJG8 249 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 LOC110117498-PIK3R3F6TDL0 507 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 SURF4O15260 269 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 CHP2O43745 196 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 IFNGP01579 166 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 IFNA16P05015 189 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 CT62P0C5K7 136 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PAICSP22234 425 aaKnown RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 HTR1FP30939 366 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 RORCP51449 518 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 GPR143P51810 404 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 MLLT10P55197 1068 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 CTBP2P56545 445 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 RIPPLY3P57055 190 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 HOXC5Q00444 222 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 ZNF267Q14586 743 aaPredicted RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 ZNF141Q15928 474 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 ZNF181Q2M3W8 571 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 DEFB133Q30KQ1 61 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 CLEC12AQ5QGZ9 265 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PERM1Q5SV97 790 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 TMPRSS11AQ6ZMR5 421 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 TMPRSS11FQ6ZWK6 438 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 ZBTB46Q86UZ6 589 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PLXDC1Q8IUK5 500 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 CENPSQ8N2Z9 138 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 KLHL36Q8N4N3 616 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 ARHGEF39Q8N4T4 335 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 ZNF614Q8N883 585 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 ZNF527Q8NB42 609 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 FANK1Q8TC84 345 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 UFD1Q92890 307 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 GFM1Q96RP9 751 aaKnown RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 COQ7Q99807 217 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PRR14Q9BWN1 585 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PLA2G12AQ9BZM1 189 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 NDEL1Q9GZM8 345 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 NXF2Q9GZY0 626 aaKnown RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 NDUFB11Q9NX14 153 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 SIDT1Q9NXL6 827 aaKnown RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 GALNT8Q9NY28 637 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 PLEKHB1Q9UF11 243 aaPredicted RBP10.82□□□□□ -0.68
USF1-208ENST00000528768 DAPK2Q9UIK4 370 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 DOPEY1Q5JWR5 2465 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 RELNP78509 3460 aa10.82□□□□□ -0.68
USF1-208ENST00000528768 KIF26BQ2KJY2 2108 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 GXYLT2A0PJZ3 443 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 ANKRD33BA6NCL7 494 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 RIIAD1A6NNX1 92 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 EFCAB7A8K855 629 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.81□□□□□ -0.68
USF1-208ENST00000528768 D6RAR5 112 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 PEX12O00623 359 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 FOXS1O43638 330 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 DUX1O43812 170 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 PPM1BO75688 479 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SULT1C4O75897 302 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 CPEP16870 476 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 LCN1P31025 176 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 IDUAP35475 653 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 GCGRP47871 477 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 RFX3P48380 749 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 EMDP50402 254 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 ATP12AP54707 1039 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SNRPNP63162 240 aaKnown RBP10.81□□□□□ -0.68
USF1-208ENST00000528768 IGFBP7Q16270 282 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 MAPK14Q16539 360 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms