RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 HDGFL3Q9Y3E1 203 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 USH1CQ9Y6N9 552 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 KIAA1549Q9HCM3 1950 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 A0A0G2JPF8 293 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 AGAP5A6NIR3 686 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 HNRNPCL2B2RXH8 293 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 HNRNPCL3B7ZW38 293 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 SULT2B1O00204 365 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 FAAHO00519 579 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 POLR3GO15318 223 aaPredicted RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 OIP5O43482 229 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 DNPH1O43598 174 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 HNRNPCL1O60812 293 aaKnown RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 CNOT4O95628 575 aaKnown RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 GSNP06396 782 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 HNRNPCL4P0DMR1 293 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 CD99P14209 185 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 PSMB1P20618 241 aaKnown RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 FPR1P21462 350 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 PPIBP23284 216 aaKnown RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 AGTR1P30556 359 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 CRATP43155 626 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 CRISP3P54108 245 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 NR1H2P55055 460 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 CASP9P55211 416 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 LARS2Q15031 903 aaKnown RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 PDK3Q15120 406 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 TOMM34Q15785 309 aaPredicted RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 MAPK14Q16539 360 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 EXOC3L2Q2M3D2 409 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 SLC9B1Q4ZJI4 515 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 FRRS1Q6ZNA5 592 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 TMPPEQ6ZT21 453 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 PLEKHM3Q6ZWE6 761 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 MTDHQ86UE4 582 aaKnown RBP8.57□□□□□ -1.04
CHD7-208ENST00000528280 FAM71CQ8NEG0 241 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 ROBO4Q8WZ75 1007 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 PIGTQ969N2 578 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 OR5B2Q96R09 309 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 NPAS1Q99742 590 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 INPP5KQ9BT40 448 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 PLEKHF2Q9H8W4 249 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 TPT1P8Q9HAU6 139 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 TCF7L2Q9NQB0 619 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 KLHL13Q9P2N7 655 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 KCNE5Q9UJ90 142 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 TRAPPC4Q9Y296 219 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 IFT52Q9Y366 437 aa8.57□□□□□ -1.04
CHD7-208ENST00000528280 CFAP73A6NFT4 308 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 ZNF724A8MTY0 619 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 GPR171O14626 319 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 ZNF208O43345 1280 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 EIF1BO60739 113 aaKnown RBP8.56□□□□□ -1.04
CHD7-208ENST00000528280 CYTIPO60759 359 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PMS2P2O95744 297 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 TFPTP0C1Z6 253 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 TFPIP10646 304 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 NID1P14543 1247 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 RYKP34925 604 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 CDKN2CP42773 168 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 SLC1A3P43003 542 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 IDH2P48735 452 aaKnown RBP8.56□□□□□ -1.04
CHD7-208ENST00000528280 DIO1P49895 249 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 DSTNP60981 165 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 COPZ1P61923 177 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PPP2R2AP63151 447 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 RASGEF1BQ0VAM2 473 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 SYPL1Q16563 259 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 NDUFAF6Q330K2 333 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 SYT14P1Q58G82 188 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 BEX5Q5H9J7 111 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 C6orf10Q5SRN2 563 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PRAMEF8Q5VWM4 474 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PRAMEF7Q5VXH5 474 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PAMR1Q6UXH9 720 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 STAC2Q6ZMT1 411 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 ZNF550Q7Z398 422 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 TUSC5Q8IXB3 177 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 WDR60Q8WVS4 1066 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 STON2Q8WXE9 905 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 HSD17B8Q92506 261 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 DDIT4LQ96D03 193 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 ZG16BQ96DA0 208 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 OR52B2Q96RD2 323 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PIP5K1AQ99755 562 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 NAA11Q9BSU3 229 aaPredicted RBP8.56□□□□□ -1.04
CHD7-208ENST00000528280 CCDC106Q9BWC9 280 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
CHD7-208ENST00000528280 SLC38A1Q9H2H9 487 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 BCO1Q9HAY6 547 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 MRGBPQ9NV56 204 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 INTS9Q9NV88 658 aaKnown RBP8.56□□□□□ -1.04
CHD7-208ENST00000528280 BEX4Q9NWD9 120 aaPredicted RBP8.56□□□□□ -1.04
CHD7-208ENST00000528280 KLHL28Q9NXS3 571 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 EMC3Q9P0I2 261 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 CHRNA9Q9UGM1 479 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 CLEC4AQ9UMR7 237 aa8.56□□□□□ -1.04
CHD7-208ENST00000528280 PRRC2AP48634 2157 aaKnown RBP8.55□□□□□ -1.04
CHD7-208ENST00000528280 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 CLIC1O00299 241 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms